RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 ALDH3A2P51648 485 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 MAD2L1Q13257 205 aaPredicted RBP24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 GTF2H2Q13888 395 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 INO80DQ53TQ3 878 aaPredicted RBP24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 ADGRF1Q5T601 910 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 GTF2H2CQ6P1K8 395 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 FAM43BQ6ZT52 329 aaPredicted RBP24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 TAS2R42Q7RTR8 314 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 ACTL8Q9H568 366 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 GORASP2Q9H8Y8 452 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 PREBQ9HCU5 417 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 SLC30A1Q9Y6M5 507 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 ZFC3H1O60293 1989 aaKnown RBP24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 ZNF840PA6NDX5 716 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 OR7A17O14581 309 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 SEC24DO94855 1032 aaPredicted RBP24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 PRKAR2AP13861 404 aaKnown RBP24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 SLC11A1P49279 550 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 SBSNQ6UWP8 590 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 LYSMD3Q7Z3D4 306 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 FAM126BQ8IXS8 530 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 POP5Q969H6 163 aaKnown RBP24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 PPP1R14BQ96C90 147 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 CASD1Q96PB1 797 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 ZBTB18Q99592 522 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 SEPHS2Q99611 448 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 RRAGCQ9HB90 399 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 MAGEE1Q9HCI5 957 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 GALNT8Q9NY28 637 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 PCDHGA11Q9Y5H2 935 aa24.26■■□□□ 1.47
SYNGAP1-206ENST00000479510 SNAP29O95721 258 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 G6PDP11413 515 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 HOXB6P17509 224 aaKnown RBP24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 RPL10P27635 214 aaKnown RBP24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 HMGCLP35914 325 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 TUFMP49411 452 aaKnown RBP24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 GRSF1Q12849 480 aaKnown RBP eCLIP24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 NR6A1Q15406 480 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 RTP2Q5QGT7 225 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 RNF219Q5W0B1 726 aaPredicted RBP24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 DTWD1Q8N5C7 304 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 OR52E4Q8NGH9 312 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 ITFG1Q8TB96 612 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 ESAMQ96AP7 390 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 TMEM175Q9BSA9 504 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 TTPALQ9BTX7 342 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 UGT2B28Q9BY64 529 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 LIN28AQ9H9Z2 209 aaKnown RBP24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 NTN4Q9HB63 628 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 EBF1Q9UH73 591 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 PCDHB7Q9Y5E2 793 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 A0A0J9YVX5 310 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 FZD6O60353 706 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 STC2O76061 302 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 KCNH1O95259 989 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 ARSFP54793 590 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 ARF5P84085 180 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 DAG1Q14118 895 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 CBX2Q14781 532 aaPredicted RBP24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 AP5B1Q2VPB7 878 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 CXorf57Q6NSI4 855 aaKnown RBP24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 GLB1L3Q8NCI6 653 aaPredicted RBP24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 OR4F6Q8NGB9 312 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 SMIM14Q96QK8 99 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 BPIFA1Q9NP55 256 aa24.25■■□□□ 1.47
SYNGAP1-206ENST00000479510 FFAR2O15552 330 aa24.24■■□□□ 1.47
SYNGAP1-206ENST00000479510 CPNE6O95741 557 aa24.24■■□□□ 1.47
SYNGAP1-206ENST00000479510 KLKB1P03952 638 aa24.24■■□□□ 1.47
SYNGAP1-206ENST00000479510 JUNBP17275 347 aaPredicted RBP24.24■■□□□ 1.47
SYNGAP1-206ENST00000479510 CORO1AP31146 461 aaKnown RBP24.24■■□□□ 1.47
SYNGAP1-206ENST00000479510 RGS4P49798 205 aa24.24■■□□□ 1.47
SYNGAP1-206ENST00000479510 PRKCZQ05513 592 aa24.24■■□□□ 1.47
SYNGAP1-206ENST00000479510 CHRNB3Q05901 458 aa24.24■■□□□ 1.47
SYNGAP1-206ENST00000479510 EPS8Q12929 822 aa24.24■■□□□ 1.47
SYNGAP1-206ENST00000479510 KIAA0040Q15053 153 aa24.24■■□□□ 1.47
SYNGAP1-206ENST00000479510 CDK15Q96Q40 435 aa24.24■■□□□ 1.47
SYNGAP1-206ENST00000479510 SARS2Q9NP81 518 aaKnown RBP24.24■■□□□ 1.47
SYNGAP1-206ENST00000479510 SMPD4Q9NXE4 827 aa24.24■■□□□ 1.47
SYNGAP1-206ENST00000479510 ASIC5Q9NY37 505 aa24.24■■□□□ 1.47
SYNGAP1-206ENST00000479510 LHX3Q9UBR4 397 aa24.24■■□□□ 1.47
SYNGAP1-206ENST00000479510 EIF3LQ9Y262 564 aaKnown RBP24.24■■□□□ 1.47
SYNGAP1-206ENST00000479510 UPK1AO00322 258 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 COCHO43405 550 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 WDR47O94967 919 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 GJB5O95377 273 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 ZNF7P17097 686 aaPredicted RBP24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 HMOX2P30519 316 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 HTR6P50406 440 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 TRAF3Q13114 568 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 PMS2P3Q13401 168 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 OFCC1Q8IZS5 231 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 PPM1MQ96MI6 270 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 GLT1D1Q96MS3 346 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 SH3GL1Q99961 368 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 POLR1BQ9H9Y6 1135 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 CCL27Q9Y4X3 112 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 OARD1Q9Y530 152 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 SLC28A1O00337 649 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 RGS14O43566 566 aa24.23■■□□□ 1.47
SYNGAP1-206ENST00000479510 CD160O95971 181 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms