RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 CFAP206Q8IYR0 622 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 KRT222Q8N1A0 295 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 RCBTB1Q8NDN9 531 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 SPATA4Q8NEY3 305 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 OR2L2Q8NH16 312 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 RNF31Q96EP0 1072 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 DCUN1D1Q96GG9 259 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 GFM1Q96RP9 751 aaKnown RBP12.19□□□□□ -0.46
APTX-220ENST00000476858 IL22Q9GZX6 179 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 SLC17A6Q9P2U8 582 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 GALPQ9UBC7 116 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 LHX6Q9UPM6 363 aa12.19□□□□□ -0.46
APTX-220ENST00000476858 MGAT4DA6NG13 374 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 CD3EAPO15446 510 aaKnown RBP12.18□□□□□ -0.46
APTX-220ENST00000476858 IDSP22304 550 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 ETV5P41161 510 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 MAPK9P45984 424 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 ITGA8P53708 1063 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 CSE1LP55060 971 aaKnown RBP12.18□□□□□ -0.46
APTX-220ENST00000476858 PRAMEP78395 509 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 DHX9Q08211 1270 aaKnown RBP12.18□□□□□ -0.46
APTX-220ENST00000476858 GPR18Q14330 331 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 C16orf72Q14CZ0 275 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 ANKRD20A4Q4UJ75 823 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 AGAP9Q5VTM2 703 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 VRK3Q8IV63 474 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 LMNTD1Q8N9Z9 388 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 GRK7Q8WTQ7 553 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 PMEPA1Q969W9 287 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 ZNF669Q96BR6 464 aaPredicted RBP12.18□□□□□ -0.46
APTX-220ENST00000476858 LINC00615Q96LM1 132 aaPredicted RBP12.18□□□□□ -0.46
APTX-220ENST00000476858 ZCCHC2Q9C0B9 1178 aaKnown RBP12.18□□□□□ -0.46
APTX-220ENST00000476858 COG4Q9H9E3 785 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 EPB41L5Q9HCM4 733 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 SARS2Q9NP81 518 aaKnown RBP12.18□□□□□ -0.46
APTX-220ENST00000476858 CATSPERZQ9NTU4 200 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 KCNK4Q9NYG8 393 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 SATB2Q9UPW6 733 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 SNX24Q9Y343 169 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 MAP1BP46821 2468 aaKnown RBP12.18□□□□□ -0.46
APTX-220ENST00000476858 USP24Q9UPU5 2620 aa12.18□□□□□ -0.46
APTX-220ENST00000476858 ACACBO00763 2458 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 IGHV5-10-1A0A0J9YXX1 117 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 TLX3O43711 291 aaPredicted RBP12.17□□□□□ -0.46
APTX-220ENST00000476858 BRINP1O60477 761 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 PROS1P07225 676 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 PNLIPP16233 465 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 TYRP1P17643 537 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 XRCC1P18887 633 aaPredicted RBP12.17□□□□□ -0.46
APTX-220ENST00000476858 ITIH1P19827 911 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 PAFAH1B1P43034 410 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 GFERP55789 205 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 ZFP36L1Q07352 338 aaKnown RBP12.17□□□□□ -0.46
APTX-220ENST00000476858 FASTKD3Q14CZ7 662 aaKnown RBP12.17□□□□□ -0.46
APTX-220ENST00000476858 FASTKD1Q53R41 847 aaKnown RBP12.17□□□□□ -0.46
APTX-220ENST00000476858 C3orf38Q5JPI3 329 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 CTSL3PQ5NE16 218 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 CAPRIN2Q6IMN6 1127 aaKnown RBP12.17□□□□□ -0.46
APTX-220ENST00000476858 HIBCHQ6NVY1 386 aaPredicted RBP12.17□□□□□ -0.46
APTX-220ENST00000476858 CASC4Q6P4E1 433 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 FOXR1Q6PIV2 292 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 WASH2PQ6VEQ5 465 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 PACS1Q6VY07 963 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 CENPUQ71F23 418 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 DENND6AQ8IWF6 608 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 PHC3Q8NDX5 983 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 RSC1A1Q92681 617 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 FAM136AQ96C01 138 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 CCDC74BQ96LY2 380 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 DEPDC7Q96QD5 511 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 CCM2Q9BSQ5 444 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 P2RY12Q9H244 342 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 OR52A5Q9H2C5 316 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 DPH5Q9H2P9 285 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 MRM3Q9HC36 420 aaKnown RBP12.17□□□□□ -0.46
APTX-220ENST00000476858 SLC40A1Q9NP59 571 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 WASH6PQ9NQA3 447 aa12.17□□□□□ -0.46
APTX-220ENST00000476858 IMP3Q9NV31 184 aaKnown RBP12.17□□□□□ -0.46
APTX-220ENST00000476858 DNMT3AQ9Y6K1 912 aaPredicted RBP12.17□□□□□ -0.46
APTX-220ENST00000476858 KIR2DS5A0A0G2JLQ3 304 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 A0A0G2JNG1 304 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 KRT87PA6NCN2 255 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 SDR42E2A6NKP2 422 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 BHMG1C9JSJ3 638 aaPredicted RBP12.16□□□□□ -0.46
APTX-220ENST00000476858 CCDC188H7C350 402 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 KIR2DS3K7RE56 304 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 KIF1CO43896 1103 aaKnown RBP12.16□□□□□ -0.46
APTX-220ENST00000476858 SEC31AO94979 1220 aaKnown RBP12.16□□□□□ -0.46
APTX-220ENST00000476858 TPBGLP0DKB5 382 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 CDK4P11802 303 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 MLNP12872 115 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 CCL4P13236 92 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 CCR7P32248 378 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 ABCG1P45844 678 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 LEPRP48357 1165 aaKnown RBP12.16□□□□□ -0.46
APTX-220ENST00000476858 PGGT1BP53609 377 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 INHBCP55103 352 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 GABREP78334 506 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 ITIH4Q14624 930 aa12.16□□□□□ -0.46
APTX-220ENST00000476858 KIR2DS5Q14953 304 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms