RNA–Protein interactions for RNA: ENST00000474873.5

HPS1-210, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 698 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-210ENST00000474873 EBNA1BP2Q99848 306 aaKnown RBP7.88□□□□□ -1.15
HPS1-210ENST00000474873 CCDC3Q9BQI4 270 aa7.88□□□□□ -1.15
HPS1-210ENST00000474873 CCM2Q9BSQ5 444 aa7.88□□□□□ -1.15
HPS1-210ENST00000474873 SARS2Q9NP81 518 aaKnown RBP7.88□□□□□ -1.15
HPS1-210ENST00000474873 MARCH4Q9P2E8 410 aaPredicted RBP7.88□□□□□ -1.15
HPS1-210ENST00000474873 VPS9D1Q9Y2B5 631 aa7.88□□□□□ -1.15
HPS1-210ENST00000474873 RNF215Q9Y6U7 377 aa7.88□□□□□ -1.15
HPS1-210ENST00000474873 FAM169AQ9Y6X4 670 aa7.88□□□□□ -1.15
HPS1-210ENST00000474873 ZFC3H1O60293 1989 aaKnown RBP7.88□□□□□ -1.15
HPS1-210ENST00000474873 FREM2Q5SZK8 3169 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 IGF2RP11717 2491 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 TRBV23OR9-2A0A075B6M9 112 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 CTAGE15A4D2H0 777 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 CYSRT1A8MQ03 144 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 PDZK1P1A8MUH7 402 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 E7ESA3 106 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 PRMT5O14744 637 aaPredicted RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 PPM1DO15297 605 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 HYAL3O43820 417 aaPredicted RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 OR1I1O60431 355 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 NDUFS3O75489 264 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 TCEA3O75764 348 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 FTH1P02794 183 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 CTAGE8P0CG41 777 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 JUPP14923 745 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 BRAFP15056 766 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 OGNP20774 298 aaKnown RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 RPS3P23396 243 aaKnown RBP eCLIP7.87□□□□□ -1.15
HPS1-210ENST00000474873 RPL10P27635 214 aaKnown RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 ELK3P41970 407 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 HALP42357 657 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 ADARP55265 1226 aaKnown RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 PLOD1Q02809 727 aaPredicted RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 RPA4Q13156 261 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 SQSTM1Q13501 440 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 THOC5Q13769 683 aaKnown RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 NFE2L1Q14494 772 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 CLPPQ16740 277 aaPredicted RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 LONRF1Q17RB8 773 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 TYSND1Q2T9J0 566 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 BBS9Q3SYG4 887 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 ZNF658BQ4V348 819 aaPredicted RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 GLE1Q53GS7 698 aaKnown RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 RNF187Q5TA31 235 aaPredicted RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 C8orf74Q6P047 294 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 ZNF449Q6P9G9 518 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 FAM83HQ6ZRV2 1179 aaPredicted RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 SPRED1Q7Z699 444 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 LDB1Q86U70 411 aaPredicted RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 CTAGE6Q86UF2 777 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 CILP2Q8IUL8 1156 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 CTAGE4Q8IX94 777 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 RBM12BQ8IXT5 1001 aaKnown RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 OTUD6BQ8N6M0 293 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 CEP112Q8N8E3 955 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 DCBLD1Q8N8Z6 715 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.87□□□□□ -1.15
HPS1-210ENST00000474873 GABPB2Q8TAK5 448 aaPredicted RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 HM13Q8TCT9 377 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 CALML6Q8TD86 181 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 NAT14Q8WUY8 206 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 SEC14L1Q92503 715 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 GRAMD1AQ96CP6 724 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 PWWP2AQ96N64 755 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 TRIM56Q9BRZ2 755 aaKnown RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 LRRC1Q9BTT6 524 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 SCNM1Q9BWG6 230 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 CARD6Q9BX69 1037 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 TSSK1BQ9BXA7 367 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 DPH5Q9H2P9 285 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 STN1Q9H668 368 aaKnown RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 UCK1Q9HA47 277 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 C20orf96Q9NUD7 363 aaPredicted RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 GRHL1Q9NZI5 618 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 SCHIP1Q9P0W5 487 aaPredicted RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 ZNF624Q9P2J8 865 aaPredicted RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 CPNE7Q9UBL6 633 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 ZC3H7BQ9UGR2 993 aaKnown RBP7.87□□□□□ -1.15
HPS1-210ENST00000474873 RABGEF1Q9UJ41 708 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 ANGPTL2Q9UKU9 493 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 CLCA2Q9UQC9 943 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 WDR37Q9Y2I8 494 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 NEUROG3Q9Y4Z2 214 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 TEX264Q9Y6I9 313 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 PRSS21Q9Y6M0 314 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 UNC13CQ8NB66 2214 aa7.87□□□□□ -1.15
HPS1-210ENST00000474873 DMXL2Q8TDJ6 3036 aa7.86□□□□□ -1.15
HPS1-210ENST00000474873 A0A1W2PQM1 296 aa7.86□□□□□ -1.15
HPS1-210ENST00000474873 GOLGA8KD6RF30 607 aa7.86□□□□□ -1.15
HPS1-210ENST00000474873 GOLGA8TH3BQL2 631 aa7.86□□□□□ -1.15
HPS1-210ENST00000474873 NTN3O00634 580 aaPredicted RBP7.86□□□□□ -1.15
HPS1-210ENST00000474873 LIN7AO14910 233 aaPredicted RBP7.86□□□□□ -1.15
HPS1-210ENST00000474873 B4GAT1O43505 415 aa7.86□□□□□ -1.15
HPS1-210ENST00000474873 BANF1O75531 89 aa7.86□□□□□ -1.15
HPS1-210ENST00000474873 S1PR4O95977 384 aa7.86□□□□□ -1.15
HPS1-210ENST00000474873 TOP3BO95985 862 aaKnown RBP7.86□□□□□ -1.15
HPS1-210ENST00000474873 MT-CO3P00414 261 aa7.86□□□□□ -1.15
HPS1-210ENST00000474873 VIPP01282 170 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms