RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 YIPF4Q9BSR8 244 aa13.11□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 HIF3AQ9Y2N7 669 aa13.11□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MRPS17Q9Y2R5 130 aaKnown RBP13.11□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 COL6A1P12109 1028 aa13.11□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ZNF143P52747 638 aaPredicted RBP13.11□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CDH11P55287 796 aa13.11□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ALYREFQ86V81 257 aaKnown RBP13.11□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 UPF1Q92900 1129 aaKnown RBP eCLIP13.11□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PWWP2AQ96N64 755 aa13.11□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 FAM240BA0A1B0GVZ2 78 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 OAZ2O95190 189 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 SSTP61278 116 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CDK18Q07002 472 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 GLIS3Q8NEA6 775 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TBC1D17Q9HA65 648 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CCL22O00626 93 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 AZIN1O14977 448 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 LINGO3P0C6S8 592 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 WNT3AP56704 352 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 EARS2Q5JPH6 523 aaKnown RBP13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 COX18Q8N8Q8 333 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 LENG1Q96BZ8 264 aaPredicted RBP13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TRMT61BQ9BVS5 477 aaKnown RBP13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 IL25Q9H293 177 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MTRRQ9UBK8 725 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ZNF521Q96K83 1311 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 DOPEY2Q9Y3R5 2298 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 COX4I1P13073 169 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MAGEA12P43365 314 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 AVPR1BP47901 424 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 HSPA7P48741 367 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CRYBB1P53674 252 aaPredicted RBP13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 C1QTNF8P60827 252 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 AADACL4Q5VUY2 407 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 RIOX2Q8IUF8 465 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 RNF157Q96PX1 679 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 GNG13Q9P2W3 67 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 RAI2Q9Y5P3 530 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 SVILO95425 2214 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PI4KAP42356 2102 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 SCGB1D2O95969 90 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 RAB4AP20338 218 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 GRK6P43250 576 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 NFATC2Q13469 925 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 OTOP3Q7RTS5 596 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 FAM46DQ8NEK8 389 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 OR2AJ1Q8NGZ0 328 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 GPR151Q8TDV0 419 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 OTUB2Q96DC9 234 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 DNAJA3Q96EY1 480 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CENPMQ9NSP4 180 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 RUVBL1Q9Y265 456 aaKnown RBP13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TMEM88BA6NKF7 163 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PPM1BO75688 479 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 NRLP54845 237 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TTC27Q6P3X3 843 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ZBTB8BQ8NAP8 495 aaPredicted RBP13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 KXD1Q9BQD3 176 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 AP3M1Q9Y2T2 418 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 HBS1LQ9Y450 684 aaKnown RBP13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TREHO43280 583 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CSTBP04080 98 aaKnown RBP13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 EHD4Q9H223 541 aa13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 POLMQ9NP87 494 aaPredicted RBP13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PDP1Q9P0J1 537 aaPredicted RBP13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 RBMX2Q9Y388 322 aaKnown RBP13.1□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CCRL2O00421 344 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ITGA2BP08514 1039 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CD47Q08722 323 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 RUNDC3AQ59EK9 446 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ARL14EPQ8N8R7 260 aaPredicted RBP13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MINDY2Q8NBR6 621 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PIK3C3Q8NEB9 887 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 GAB3Q8WWW8 586 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 FBXO5Q9UKT4 447 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ZNF510Q9Y2H8 683 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CFAP20Q9Y6A4 193 aaKnown RBP13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ZNF726A6NNF4 738 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 EIF1AYO14602 144 aaKnown RBP13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ASGR1P07306 291 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 GPD2P43304 727 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 RPIAP49247 311 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PLGLAQ15195 96 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ZSCAN4Q8NAM6 433 aaPredicted RBP13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TRPM4Q8TD43 1214 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 DNAJA4Q8WW22 397 aaPredicted RBP13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 SNX15Q9NRS6 342 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PCDHGC4Q9Y5F7 938 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ENPP7Q6UWV6 458 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ARHGAP22Q7Z5H3 698 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MON1AQ86VX9 555 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 RDH11Q8TC12 318 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CLPTM1LQ96KA5 538 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CDT1Q9H211 546 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 LOC100509620A0A075B734 347 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 GPR89AB7ZAQ6 455 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 GPR89BP0CG08 455 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 SCN1BQ07699 218 aa13.09□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ST3GAL1Q11201 340 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms