RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 RTP4Q96DX8 246 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 TGM7Q96PF1 710 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 FRMD8P1Q9BZ68 369 aaPredicted RBP18.7■□□□□ 0.58
COL7A1-207ENST00000467985 RAB33BQ9H082 229 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 CRLS1Q9UJA2 301 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 PILRAQ9UKJ1 303 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 CAPN6Q9Y6Q1 641 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 COL6A6A6NMZ7 2263 aa18.7■□□□□ 0.58
COL7A1-207ENST00000467985 TLN1Q9Y490 2541 aaKnown RBP18.69■□□□□ 0.58
COL7A1-207ENST00000467985 A0A0U1RQJ8 604 aa18.69■□□□□ 0.58
COL7A1-207ENST00000467985 RASSF9O75901 435 aa18.69■□□□□ 0.58
COL7A1-207ENST00000467985 MAP4P27816 1152 aaKnown RBP18.69■□□□□ 0.58
COL7A1-207ENST00000467985 SRSF6Q13247 344 aaKnown RBP18.69■□□□□ 0.58
COL7A1-207ENST00000467985 NFE2L1Q14494 772 aa18.69■□□□□ 0.58
COL7A1-207ENST00000467985 SPARCL1Q14515 664 aa18.69■□□□□ 0.58
COL7A1-207ENST00000467985 CYB5D1Q6P9G0 228 aa18.69■□□□□ 0.58
COL7A1-207ENST00000467985 FAM83HQ6ZRV2 1179 aaPredicted RBP18.69■□□□□ 0.58
COL7A1-207ENST00000467985 DET1Q7L5Y6 550 aa18.69■□□□□ 0.58
COL7A1-207ENST00000467985 PRSS42Q7Z5A4 293 aa18.69■□□□□ 0.58
COL7A1-207ENST00000467985 SNX20Q7Z614 316 aa18.69■□□□□ 0.58
COL7A1-207ENST00000467985 NXPE1Q8N323 547 aa18.69■□□□□ 0.58
COL7A1-207ENST00000467985 OR13C4Q8NGS5 318 aa18.69■□□□□ 0.58
COL7A1-207ENST00000467985 OR2L2Q8NH16 312 aa18.69■□□□□ 0.58
COL7A1-207ENST00000467985 ZFPM2Q8WW38 1151 aa18.69■□□□□ 0.58
COL7A1-207ENST00000467985 JPH3Q8WXH2 748 aaPredicted RBP18.69■□□□□ 0.58
COL7A1-207ENST00000467985 MED8Q96G25 268 aa18.69■□□□□ 0.58
COL7A1-207ENST00000467985 LINC00615Q96LM1 132 aaPredicted RBP18.69■□□□□ 0.58
COL7A1-207ENST00000467985 COPS8Q99627 209 aa18.69■□□□□ 0.58
COL7A1-207ENST00000467985 TMEM121Q9BTD3 319 aa18.69■□□□□ 0.58
COL7A1-207ENST00000467985 TRIT1Q9H3H1 467 aaKnown RBP18.69■□□□□ 0.58
COL7A1-207ENST00000467985 ZNF768Q9H5H4 540 aaKnown RBP18.69■□□□□ 0.58
COL7A1-207ENST00000467985 SIDT1Q9NXL6 827 aaKnown RBP18.69■□□□□ 0.58
COL7A1-207ENST00000467985 PSMD13Q9UNM6 376 aa18.69■□□□□ 0.58
COL7A1-207ENST00000467985 R3HDM2Q9Y2K5 976 aaKnown RBP18.69■□□□□ 0.58
COL7A1-207ENST00000467985 LDB2O43679 373 aa18.68■□□□□ 0.58
COL7A1-207ENST00000467985 RAD1O60671 282 aa18.68■□□□□ 0.58
COL7A1-207ENST00000467985 METTL18O95568 372 aa18.68■□□□□ 0.58
COL7A1-207ENST00000467985 MTHFD1P11586 935 aaKnown RBP18.68■□□□□ 0.58
COL7A1-207ENST00000467985 PBLDP30039 288 aaPredicted RBP18.68■□□□□ 0.58
COL7A1-207ENST00000467985 STIP1P31948 543 aaKnown RBP18.68■□□□□ 0.58
COL7A1-207ENST00000467985 SEL1L2Q5TEA6 688 aa18.68■□□□□ 0.58
COL7A1-207ENST00000467985 LINC00523Q86TU6 105 aa18.68■□□□□ 0.58
COL7A1-207ENST00000467985 NLGN4XQ8N0W4 816 aa18.68■□□□□ 0.58
COL7A1-207ENST00000467985 NLGN4YQ8NFZ3 816 aaPredicted RBP18.68■□□□□ 0.58
COL7A1-207ENST00000467985 KIAA1143Q96AT1 154 aaPredicted RBP18.68■□□□□ 0.58
COL7A1-207ENST00000467985 CTRCQ99895 268 aa18.68■□□□□ 0.58
COL7A1-207ENST00000467985 SPRY4Q9C004 299 aa18.68■□□□□ 0.58
COL7A1-207ENST00000467985 TMEM184BQ9Y519 407 aaPredicted RBP18.68■□□□□ 0.58
COL7A1-207ENST00000467985 TENM4Q6N022 2769 aa18.67■□□□□ 0.58
COL7A1-207ENST00000467985 ERI2A8K979 691 aaKnown RBP18.67■□□□□ 0.58
COL7A1-207ENST00000467985 H7C0S8 307 aa18.67■□□□□ 0.58
COL7A1-207ENST00000467985 AP2A1O95782 977 aa18.67■□□□□ 0.58
COL7A1-207ENST00000467985 CCDC175P0C221 793 aa18.67■□□□□ 0.58
COL7A1-207ENST00000467985 SLC35G4P0C7Q5 338 aa18.67■□□□□ 0.58
COL7A1-207ENST00000467985 TMPRSS15P98073 1019 aa18.67■□□□□ 0.58
COL7A1-207ENST00000467985 LY6DQ14210 128 aa18.67■□□□□ 0.58
COL7A1-207ENST00000467985 IL11RAQ14626 422 aa18.67■□□□□ 0.58
COL7A1-207ENST00000467985 PLCL1Q15111 1095 aa18.67■□□□□ 0.58
COL7A1-207ENST00000467985 CACHD1Q5VU97 1274 aa18.67■□□□□ 0.58
COL7A1-207ENST00000467985 IRGCQ6NXR0 463 aa18.67■□□□□ 0.58
COL7A1-207ENST00000467985 RSC1A1Q92681 617 aa18.67■□□□□ 0.58
COL7A1-207ENST00000467985 ALS2CR12Q96Q35 445 aa18.67■□□□□ 0.58
COL7A1-207ENST00000467985 ARHGAP9Q9BRR9 750 aa18.67■□□□□ 0.58
COL7A1-207ENST00000467985 CCM2Q9BSQ5 444 aa18.67■□□□□ 0.58
COL7A1-207ENST00000467985 EFHD1Q9BUP0 239 aa18.67■□□□□ 0.58
COL7A1-207ENST00000467985 KCNF1Q9H3M0 494 aa18.67■□□□□ 0.58
COL7A1-207ENST00000467985 VPS37BQ9H9H4 285 aa18.67■□□□□ 0.58
COL7A1-207ENST00000467985 IMP3Q9NV31 184 aaKnown RBP18.67■□□□□ 0.58
COL7A1-207ENST00000467985 NLE1Q9NVX2 485 aaPredicted RBP18.67■□□□□ 0.58
COL7A1-207ENST00000467985 GUCA1BQ9UMX6 200 aa18.67■□□□□ 0.58
COL7A1-207ENST00000467985 SPTA1P02549 2419 aa18.66■□□□□ 0.58
COL7A1-207ENST00000467985 TCRBV7S2A1N4TA0A589 114 aa18.66■□□□□ 0.58
COL7A1-207ENST00000467985 ATP1B2P14415 290 aaPredicted RBP18.66■□□□□ 0.58
COL7A1-207ENST00000467985 MC4RP32245 332 aa18.66■□□□□ 0.58
COL7A1-207ENST00000467985 LEPRP48357 1165 aaKnown RBP18.66■□□□□ 0.58
COL7A1-207ENST00000467985 PRLHRP49683 370 aa18.66■□□□□ 0.58
COL7A1-207ENST00000467985 GDF10P55107 478 aa18.66■□□□□ 0.58
COL7A1-207ENST00000467985 FOXM1Q08050 763 aa18.66■□□□□ 0.58
COL7A1-207ENST00000467985 ZNF605Q86T29 641 aa18.66■□□□□ 0.58
COL7A1-207ENST00000467985 GPR150Q8NGU9 434 aa18.66■□□□□ 0.58
COL7A1-207ENST00000467985 HM13Q8TCT9 377 aa18.66■□□□□ 0.58
COL7A1-207ENST00000467985 KLHL6Q8WZ60 621 aa18.66■□□□□ 0.58
COL7A1-207ENST00000467985 DNAJC1Q96KC8 554 aaKnown RBP18.66■□□□□ 0.58
COL7A1-207ENST00000467985 WWP1Q9H0M0 922 aa18.66■□□□□ 0.58
COL7A1-207ENST00000467985 APMAPQ9HDC9 416 aa18.66■□□□□ 0.58
COL7A1-207ENST00000467985 ZDHHC3Q9NYG2 299 aa18.66■□□□□ 0.58
COL7A1-207ENST00000467985 HEBP2Q9Y5Z4 205 aa18.66■□□□□ 0.58
COL7A1-207ENST00000467985 COLEC10Q9Y6Z7 277 aa18.66■□□□□ 0.58
COL7A1-207ENST00000467985 IGLV3-16A0A075B6K0 115 aa18.65■□□□□ 0.58
COL7A1-207ENST00000467985 C17orf113A0A1B0GUU1 675 aa18.65■□□□□ 0.58
COL7A1-207ENST00000467985 STK17BO94768 372 aa18.65■□□□□ 0.58
COL7A1-207ENST00000467985 GAS8O95995 478 aa18.65■□□□□ 0.58
COL7A1-207ENST00000467985 SFTPCP11686 197 aa18.65■□□□□ 0.58
COL7A1-207ENST00000467985 LIFP15018 202 aa18.65■□□□□ 0.58
COL7A1-207ENST00000467985 WT1P19544 449 aaPredicted RBP18.65■□□□□ 0.58
COL7A1-207ENST00000467985 NDUFS1P28331 727 aa18.65■□□□□ 0.58
COL7A1-207ENST00000467985 SEPHS1P49903 392 aa18.65■□□□□ 0.58
COL7A1-207ENST00000467985 ABHD18Q0P651 414 aa18.65■□□□□ 0.58
COL7A1-207ENST00000467985 LAMB3Q13751 1172 aa18.65■□□□□ 0.58
COL7A1-207ENST00000467985 SEPT6Q14141 434 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms