RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 TBC1D3EA0A087X179 549 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 A0A087X1B8 175 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 TBC1D3KA0A087X1G2 549 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 A0A096LPK6 155 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 TBC1D3FA6NER0 549 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-215ENST00000465457 TBC1D3LB9A6J9 549 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 SNAP91O60641 907 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 PLIN3O60664 434 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 BPGMP07738 259 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 FAM87AP0C7U9 286 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 TBC1D3HP0C7X1 549 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 STMN1P16949 149 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 STK19P49842 368 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-215ENST00000465457 PRKAA2P54646 552 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 IHHQ14623 411 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 USP10Q14694 798 aaKnown RBP13.68□□□□□ -0.22
HDAC6-215ENST00000465457 GRM3Q14832 879 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 TBC1D3GQ6DHY5 549 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 TBC1D3CQ6IPX1 549 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 FOXR1Q6PIV2 292 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 AFTPHQ6ULP2 937 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-215ENST00000465457 CDHR3Q6ZTQ4 885 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 CCDC121Q6ZUS5 278 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 GLT6D1Q7Z4J2 308 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 CLEC14AQ86T13 490 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 SRLQ86TD4 932 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 NUDCD3Q8IVD9 361 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 TBC1D3Q8IZP1 549 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-215ENST00000465457 ARMC2Q8NEN0 867 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 BLOC1S5Q8TDH9 187 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 EXTL1Q92935 676 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 C7orf26Q96N11 449 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 SLC46A1Q96NT5 459 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 TUBGCP5Q96RT8 1024 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 SIKE1Q9BRV8 207 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 TSSK1BQ9BXA7 367 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 CEP44Q9C0F1 390 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 FZD3Q9NPG1 666 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 NLE1Q9NVX2 485 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-215ENST00000465457 IL1RAPL1Q9NZN1 696 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 MTO1Q9Y2Z2 717 aaKnown RBP13.68□□□□□ -0.22
HDAC6-215ENST00000465457 ENTPD2Q9Y5L3 495 aa13.68□□□□□ -0.22
HDAC6-215ENST00000465457 A0A1W2PQ67 120 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 CDRT15L2A8MXV6 281 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 SUV39H1O43463 412 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 RNASEH1O60930 286 aaKnown RBP13.67□□□□□ -0.22
HDAC6-215ENST00000465457 CD160O95971 181 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 AHSGP02765 367 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 GRK2P25098 689 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 SLC26A3P40879 764 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 RGRP47804 291 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 ZNF140P52738 457 aaPredicted RBP13.67□□□□□ -0.22
HDAC6-215ENST00000465457 RAB10P61026 200 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 GALNT3Q14435 633 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 ZNF542PQ5EBM4 170 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 PITRM1Q5JRX3 1037 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 AARS2Q5JTZ9 985 aaKnown RBP13.67□□□□□ -0.22
HDAC6-215ENST00000465457 ARMC12Q5T9G4 340 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 RNF187Q5TA31 235 aaPredicted RBP13.67□□□□□ -0.22
HDAC6-215ENST00000465457 LINGO4Q6UY18 593 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 ATG14Q6ZNE5 492 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 RAPH1Q70E73 1250 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 SDCCAG8Q86SQ7 713 aaPredicted RBP13.67□□□□□ -0.22
HDAC6-215ENST00000465457 CILP2Q8IUL8 1156 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 OTUD6BQ8N6M0 293 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 CCDC63Q8NA47 563 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 OR6P1Q8NGX9 317 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 ARRDC3Q96B67 414 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 RPL10LQ96L21 214 aaKnown RBP13.67□□□□□ -0.22
HDAC6-215ENST00000465457 TCF12Q99081 682 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 KDM4CQ9H3R0 1056 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 ATP13A3Q9H7F0 1226 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 INTS10Q9NVR2 710 aaKnown RBP13.67□□□□□ -0.22
HDAC6-215ENST00000465457 WDR70Q9NW82 654 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 SLC2A6Q9UGQ3 507 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 GGT7Q9UJ14 662 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 SLC25A13Q9UJS0 675 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 SLC39A10Q9ULF5 831 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 ERVW-1Q9UQF0 538 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 CHKBQ9Y259 395 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 HS3ST2Q9Y278 367 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 ACOT9Q9Y305 439 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 USH1CQ9Y6N9 552 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 ICE1Q9Y2F5 2266 aa13.67□□□□□ -0.22
HDAC6-215ENST00000465457 FAM95CA0A1B0GW59 222 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 CCDC78A2IDD5 438 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 ANKRD66B4E2M5 251 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 FZD6O60353 706 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 PIAS2O75928 621 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 DCTN3O75935 186 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 SNUPNO95149 360 aaKnown RBP13.66□□□□□ -0.22
HDAC6-215ENST00000465457 GSRP00390 522 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 PROCP04070 461 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 C2P06681 752 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 LPOP22079 712 aaPredicted RBP13.66□□□□□ -0.22
HDAC6-215ENST00000465457 PDX1P52945 283 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 EPHB1P54762 984 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 ST8SIA6P61647 398 aa13.66□□□□□ -0.22
HDAC6-215ENST00000465457 TMPRSS15P98073 1019 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms