RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 CYP20A1Q6UW02 462 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 DEF8Q6ZN54 512 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 PLEKHM3Q6ZWE6 761 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 ZNF554Q86TJ5 538 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 CILP2Q8IUL8 1156 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 NELL1Q92832 810 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 TMBIM1Q969X1 311 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 C12orf43Q96C57 262 aaKnown RBP8.96□□□□□ -0.98
HPS4-208ENST00000464362 BBS4Q96RK4 519 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 HAPLN3Q96S86 360 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 KIFC1Q9BW19 673 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 RNF208Q9H0X6 261 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 RHBGQ9H310 441 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 TIMMDC1Q9NPL8 285 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 MIOSQ9NXC5 875 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 SPG21Q9NZD8 308 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 CFAP97Q9P2B7 532 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 STK25O00506 426 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 CXCR6O00574 342 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 PPP6CO00743 305 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 DCLK1O15075 740 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 SNAP29O95721 258 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 PPP2R1BP30154 601 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 HPCAL1P37235 193 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 FEN1P39748 380 aaKnown RBP8.96□□□□□ -0.98
HPS4-208ENST00000464362 MXD1Q05195 221 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 IL10RBQ08334 325 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 NOL9Q5SY16 702 aaKnown RBP8.96□□□□□ -0.98
HPS4-208ENST00000464362 ZNF57Q68EA5 555 aaPredicted RBP8.96□□□□□ -0.98
HPS4-208ENST00000464362 MSANTD2Q6P1R3 559 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 EPHX4Q8IUS5 362 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 ZDHHC21Q8IVQ6 265 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 C10orf53Q8N6V4 93 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 ZFP28Q8NHY6 868 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 SHKBP1Q8TBC3 707 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 ARNTL2Q8WYA1 636 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 TMIGD2Q96BF3 282 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 RNFT2Q96EX2 444 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 NSMCE3Q96MG7 304 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 HMX1Q9NP08 348 aaPredicted RBP8.96□□□□□ -0.98
HPS4-208ENST00000464362 RPS6KA6Q9UK32 745 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 MAP4K5Q9Y4K4 846 aa8.96□□□□□ -0.98
HPS4-208ENST00000464362 CACNA1CQ13936 2221 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 IGKV6-21A0A0C4DH24 114 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 H3BNX3 289 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 SAP18O00422 153 aaKnown RBP8.95□□□□□ -0.98
HPS4-208ENST00000464362 PGLSO95336 258 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 STT3AP46977 705 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 CENPAP49450 140 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 IST1P53990 364 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 PTGR1Q14914 329 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 USP41Q3LFD5 358 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 CCNYL2Q5T2Q4 361 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 LYSMD3Q7Z3D4 306 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 CYP4Z1Q86W10 505 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 ZNF366Q8N895 744 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.95□□□□□ -0.98
HPS4-208ENST00000464362 C19orf18Q8NEA5 215 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 TRPV3Q8NET8 790 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 AUTS2Q8WXX7 1259 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 UPF1Q92900 1129 aaKnown RBP eCLIP8.95□□□□□ -0.98
HPS4-208ENST00000464362 GTPBP3Q969Y2 492 aaKnown RBP8.95□□□□□ -0.98
HPS4-208ENST00000464362 UROC1Q96N76 676 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 HDHD2Q9H0R4 259 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 MRPL17Q9NRX2 175 aaKnown RBP8.95□□□□□ -0.98
HPS4-208ENST00000464362 GTF2A1LQ9UNN4 478 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 KCNE2Q9Y6J6 123 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 SQORQ9Y6N5 450 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 IGKV6D-21A0A0A0MT36 114 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 ZCWPW2A0A1B0GU75 182 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 PRR23D1E9PI22 279 aaPredicted RBP8.95□□□□□ -0.98
HPS4-208ENST00000464362 FPGTO14772 594 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 TPST2O60704 377 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 TNFRSF21O75509 655 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 IL1BP01584 269 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 PRR23D2P0DMB1 279 aaPredicted RBP8.95□□□□□ -0.98
HPS4-208ENST00000464362 KRT20P35900 424 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 NUDT6P53370 316 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 C1QTNF8P60827 252 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 NIPAL4Q0D2K0 466 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 PLA2G4EQ3MJ16 856 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 SPANXN4Q5MJ08 99 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 RAET1GQ6H3X3 334 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 FAR1Q8WVX9 515 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 KCTD13Q8WZ19 329 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 SORT1Q99523 831 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 TDRD1Q9BXT4 1180 aaKnown RBP8.95□□□□□ -0.98
HPS4-208ENST00000464362 VRTNQ9H8Y1 702 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 ABCB9Q9NP78 766 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 ITGB1BP2Q9UKP3 347 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 EMCNQ9ULC0 261 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 ASF1AQ9Y294 204 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 ACTL7AQ9Y615 435 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 GLI3P10071 1580 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 SMCHD1A6NHR9 2005 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 NAV1Q8NEY1 1877 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 A0A1B0GVM2 712 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 TCAF2A6NFQ2 919 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 A6NHS1 94 aa8.95□□□□□ -0.98
HPS4-208ENST00000464362 NEDD8-MDP1E9PL57 170 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms