RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 PAIP2Q9BPZ3 127 aaKnown RBP4.06□□□□□ -1.76
UBA3-204ENST00000461522 HERPUD2Q9BSE4 406 aa4.06□□□□□ -1.76
UBA3-204ENST00000461522 LRRC1Q9BTT6 524 aa4.06□□□□□ -1.76
UBA3-204ENST00000461522 C1QTNF5Q9BXJ0 243 aa4.06□□□□□ -1.76
UBA3-204ENST00000461522 GLIS2Q9BZE0 524 aaPredicted RBP4.06□□□□□ -1.76
UBA3-204ENST00000461522 TKTL2Q9H0I9 626 aa4.06□□□□□ -1.76
UBA3-204ENST00000461522 PPP1R3EQ9H7J1 279 aa4.06□□□□□ -1.76
UBA3-204ENST00000461522 GPR108Q9NPR9 543 aa4.06□□□□□ -1.76
UBA3-204ENST00000461522 HINT3Q9NQE9 182 aaKnown RBP4.06□□□□□ -1.76
UBA3-204ENST00000461522 TNS1Q9HBL0 1735 aaKnown RBP4.06□□□□□ -1.76
UBA3-204ENST00000461522 RREB1Q92766 1687 aa4.06□□□□□ -1.76
UBA3-204ENST00000461522 UBN2Q6ZU65 1347 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 C4BP0C0L5 1744 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 FTCDO95954 541 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 MYOD1P15172 320 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 OAS2P29728 719 aaKnown RBP4.05□□□□□ -1.76
UBA3-204ENST00000461522 BDKRB2P30411 391 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 ALDH1B1P30837 517 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 GNL1P36915 607 aaPredicted RBP4.05□□□□□ -1.76
UBA3-204ENST00000461522 GABRB2P47870 512 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 ATP12AP54707 1039 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 UFM1P61960 85 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 HSP90B2PQ58FF3 399 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 STXBP5Q5T5C0 1151 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 GGNBP1Q5YKI7 109 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 KLHL10Q6JEL2 608 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 PRR5LQ6MZQ0 368 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 RRM2BQ7LG56 351 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 ZCCHC10Q8TBK6 192 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 FRAT1Q92837 279 aaPredicted RBP4.05□□□□□ -1.76
UBA3-204ENST00000461522 SLC41A2Q96JW4 573 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 FAM110AQ9BQ89 295 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 FUZQ9BT04 418 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 GPR63Q9BZJ6 419 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 NDST4Q9H3R1 872 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 TSPY26PQ9H489 355 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 FKRPQ9H9S5 495 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 RBM28Q9NW13 759 aaKnown RBP4.05□□□□□ -1.76
UBA3-204ENST00000461522 C9orf78Q9NZ63 289 aaPredicted RBP4.05□□□□□ -1.76
UBA3-204ENST00000461522 TRMT112Q9UI30 125 aaKnown RBP4.05□□□□□ -1.76
UBA3-204ENST00000461522 TTC7AQ9ULT0 858 aaPredicted RBP4.05□□□□□ -1.76
UBA3-204ENST00000461522 A4GNTQ9UNA3 340 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 CACNA1FO60840 1977 aa4.05□□□□□ -1.76
UBA3-204ENST00000461522 MYH14Q7Z406 1995 aaKnown RBP4.04□□□□□ -1.76
UBA3-204ENST00000461522 TEX13CA0A0J9YWL9 993 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 GTPBP10A4D1E9 387 aaKnown RBP4.04□□□□□ -1.76
UBA3-204ENST00000461522 H0YIN7 160 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 EIF3FO00303 357 aaPredicted RBP4.04□□□□□ -1.76
UBA3-204ENST00000461522 CIAO1O76071 339 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 LDLRP01130 860 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 UBTFL1P0CB47 393 aaPredicted RBP4.04□□□□□ -1.76
UBA3-204ENST00000461522 COX7A2P14406 83 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 PSMA3P25788 255 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 TSPAN7P41732 249 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 PIP4K2AP48426 406 aaPredicted RBP4.04□□□□□ -1.76
UBA3-204ENST00000461522 NAP1L1P55209 391 aaKnown RBP4.04□□□□□ -1.76
UBA3-204ENST00000461522 ZBED6P86452 979 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 PDE1BQ01064 536 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 FCN2Q15485 313 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 CCDC152Q4G0S7 254 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 CCDC158Q5M9N0 1113 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 GPATCH4Q5T3I0 446 aaKnown RBP4.04□□□□□ -1.76
UBA3-204ENST00000461522 NAA35Q5VZE5 725 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 ZNF852Q6ZMS4 543 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 QSOX2Q6ZRP7 698 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 ASB18Q6ZVZ8 466 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 ANKRD18AQ8IVF6 992 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 ARL6IP6Q8N6S5 226 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 TAF15Q92804 592 aaKnown RBP eCLIP4.04□□□□□ -1.76
UBA3-204ENST00000461522 TRIM63Q969Q1 353 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 ZBTB10Q96DT7 871 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 SERINC2Q96SA4 455 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 CMKLR1Q99788 373 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 SYT17Q9BSW7 474 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 H2AFJQ9BTM1 129 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 RANBP17Q9H2T7 1088 aaKnown RBP4.04□□□□□ -1.76
UBA3-204ENST00000461522 SUDS3Q9H7L9 328 aaPredicted RBP4.04□□□□□ -1.76
UBA3-204ENST00000461522 HCFC1R1Q9NWW0 138 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 ERVK-11Q9UQG0 969 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 DLGAP4Q9Y2H0 992 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 OR2W1Q9Y3N9 320 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 LOXL2Q9Y4K0 774 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 SRCAPQ6ZRS2 3230 aa4.04□□□□□ -1.76
UBA3-204ENST00000461522 SEC14L5O43304 696 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 PRSS1P07477 247 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 HOXB5P09067 269 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 IFIT1P09914 478 aaKnown RBP4.03□□□□□ -1.76
UBA3-204ENST00000461522 RPS8P62241 208 aaKnown RBP4.03□□□□□ -1.76
UBA3-204ENST00000461522 SORDQ00796 357 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 IFT88Q13099 833 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 NAE1Q13564 534 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 GRAPQ13588 217 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 CAMK1Q14012 370 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 CCDC57Q2TAC2 916 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 DNAJC21Q5F1R6 531 aaKnown RBP4.03□□□□□ -1.76
UBA3-204ENST00000461522 C15orf52Q6ZUT6 534 aaKnown RBP4.03□□□□□ -1.76
UBA3-204ENST00000461522 KCTD8Q6ZWB6 473 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 SMIM5Q71RC9 77 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 MAATS1Q7Z4T9 603 aa4.03□□□□□ -1.76
UBA3-204ENST00000461522 PCDH20Q8N6Y1 951 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms