RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 LAMB3Q13751 1172 aa17.5■□□□□ 0.39
MSH6-207ENST00000456246 COL9A2Q14055 689 aaPredicted RBP17.5■□□□□ 0.39
MSH6-207ENST00000456246 NFE2L1Q14494 772 aa17.5■□□□□ 0.39
MSH6-207ENST00000456246 SPARCL1Q14515 664 aa17.5■□□□□ 0.39
MSH6-207ENST00000456246 RPE65Q16518 533 aa17.5■□□□□ 0.39
MSH6-207ENST00000456246 ANKS6Q68DC2 871 aa17.5■□□□□ 0.39
MSH6-207ENST00000456246 DET1Q7L5Y6 550 aa17.5■□□□□ 0.39
MSH6-207ENST00000456246 PRSS42Q7Z5A4 293 aa17.5■□□□□ 0.39
MSH6-207ENST00000456246 SLC13A5Q86YT5 568 aaPredicted RBP17.5■□□□□ 0.39
MSH6-207ENST00000456246 IL22RA1Q8N6P7 574 aa17.5■□□□□ 0.39
MSH6-207ENST00000456246 HM13Q8TCT9 377 aa17.5■□□□□ 0.39
MSH6-207ENST00000456246 STYXQ8WUJ0 223 aa17.5■□□□□ 0.39
MSH6-207ENST00000456246 NKD1Q969G9 470 aa17.5■□□□□ 0.39
MSH6-207ENST00000456246 TRIT1Q9H3H1 467 aaKnown RBP17.5■□□□□ 0.39
MSH6-207ENST00000456246 ZNF768Q9H5H4 540 aaKnown RBP17.5■□□□□ 0.39
MSH6-207ENST00000456246 NLE1Q9NVX2 485 aaPredicted RBP17.5■□□□□ 0.39
MSH6-207ENST00000456246 C17orf113A0A1B0GUU1 675 aa17.49■□□□□ 0.39
MSH6-207ENST00000456246 TCRBV7S2A1N4TA0A589 114 aa17.49■□□□□ 0.39
MSH6-207ENST00000456246 POLR1CO15160 346 aaPredicted RBP17.49■□□□□ 0.39
MSH6-207ENST00000456246 LIASO43766 372 aa17.49■□□□□ 0.39
MSH6-207ENST00000456246 KALRNO60229 2985 aa17.49■□□□□ 0.39
MSH6-207ENST00000456246 GSTM1P09488 218 aa17.49■□□□□ 0.39
MSH6-207ENST00000456246 PBLDP30039 288 aaPredicted RBP17.49■□□□□ 0.39
MSH6-207ENST00000456246 MC4RP32245 332 aa17.49■□□□□ 0.39
MSH6-207ENST00000456246 FDFT1P37268 417 aa17.49■□□□□ 0.39
MSH6-207ENST00000456246 GFERP55789 205 aa17.49■□□□□ 0.39
MSH6-207ENST00000456246 GSTM4Q03013 218 aa17.49■□□□□ 0.39
MSH6-207ENST00000456246 RPS6KA1Q15418 735 aa17.49■□□□□ 0.39
MSH6-207ENST00000456246 OASLQ15646 514 aaKnown RBP17.49■□□□□ 0.39
MSH6-207ENST00000456246 PCSK4Q6UW60 755 aa17.49■□□□□ 0.39
MSH6-207ENST00000456246 FAM83HQ6ZRV2 1179 aaPredicted RBP17.49■□□□□ 0.39
MSH6-207ENST00000456246 PMEPA1Q969W9 287 aa17.49■□□□□ 0.39
MSH6-207ENST00000456246 DNAJC1Q96KC8 554 aaKnown RBP17.49■□□□□ 0.39
MSH6-207ENST00000456246 TGM7Q96PF1 710 aa17.49■□□□□ 0.39
MSH6-207ENST00000456246 CD180Q99467 661 aa17.49■□□□□ 0.39
MSH6-207ENST00000456246 CCM2Q9BSQ5 444 aa17.49■□□□□ 0.39
MSH6-207ENST00000456246 IMP3Q9NV31 184 aaKnown RBP17.49■□□□□ 0.39
MSH6-207ENST00000456246 SIDT1Q9NXL6 827 aaKnown RBP17.49■□□□□ 0.39
MSH6-207ENST00000456246 ZDHHC3Q9NYG2 299 aa17.49■□□□□ 0.39
MSH6-207ENST00000456246 PCDHGA4Q9Y5G9 962 aa17.49■□□□□ 0.39
MSH6-207ENST00000456246 HEBP2Q9Y5Z4 205 aa17.49■□□□□ 0.39
MSH6-207ENST00000456246 COL6A6A6NMZ7 2263 aa17.49■□□□□ 0.39
MSH6-207ENST00000456246 ATMQ13315 3056 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 IGLV3-16A0A075B6K0 115 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 TRBV5-4A0A0C4DH59 114 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 RAD1O60671 282 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 RASSF9O75901 435 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 ATP1B2P14415 290 aaPredicted RBP17.48■□□□□ 0.39
MSH6-207ENST00000456246 MAP4P27816 1152 aaKnown RBP17.48■□□□□ 0.39
MSH6-207ENST00000456246 NDUFS1P28331 727 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 TMPRSS15P98073 1019 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 CDH17Q12864 832 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 SEPT6Q14141 434 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 PLCL1Q15111 1095 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 MEI1Q5TIA1 1274 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 KIAA1614Q5VZ46 1190 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 VASH2Q86V25 355 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 CACNA2D3Q8IZS8 1091 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 NLGN4XQ8N0W4 816 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 NLGN4YQ8NFZ3 816 aaPredicted RBP17.48■□□□□ 0.39
MSH6-207ENST00000456246 ATG4AQ8WYN0 398 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 RSC1A1Q92681 617 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 EFHD1Q9BUP0 239 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 PILRAQ9UKJ1 303 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 PSMD13Q9UNM6 376 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 ZNF148Q9UQR1 794 aa17.48■□□□□ 0.39
MSH6-207ENST00000456246 QSOX1O00391 747 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 PSMA3P25788 255 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 ACRV1P26436 265 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 CACNG1Q06432 222 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 MAP7Q14244 749 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 IL11RAQ14626 422 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 POU6F1Q14863 301 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 SKIDA1Q1XH10 827 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 ZRANB3Q5FWF4 1079 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 CACHD1Q5VU97 1274 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 IRGCQ6NXR0 463 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 ZNF449Q6P9G9 518 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 DNAAF3Q8N9W5 541 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 GPR150Q8NGU9 434 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 MAIP1Q8WWC4 291 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 KLHL6Q8WZ60 621 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 UBXN4Q92575 508 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 KIAA1143Q96AT1 154 aaPredicted RBP17.47■□□□□ 0.39
MSH6-207ENST00000456246 CDKN2AIPNLQ96HQ2 116 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 C12orf66Q96MD2 445 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 WWP1Q9H0M0 922 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 ZKSCAN5Q9Y2L8 839 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 TMEM184BQ9Y519 407 aaPredicted RBP17.47■□□□□ 0.39
MSH6-207ENST00000456246 COLEC10Q9Y6Z7 277 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 BAHCC1Q9P281 2608 aa17.47■□□□□ 0.39
MSH6-207ENST00000456246 HEATR9A2RTY3 570 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 MROH6A6NGR9 719 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 E7EVH7 732 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 SGTAO43765 313 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 STK17BO94768 372 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 SUN1O94901 812 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 AP2A2O94973 939 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 IFNB1P01574 187 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 TPH1P17752 444 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms