RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 SAC3D1A6NKF1 404 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 F5H5T6 163 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 PFDN1O60925 122 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 ATP6AP2O75787 350 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 CNTN5O94779 1100 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 GJB5O95377 273 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 HPRP00739 348 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 MSH3P20585 1137 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 FGFR3P22607 806 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 HMOX2P30519 316 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 OR1E1P30953 314 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 CD52P31358 61 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 NBL1P41271 181 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 RPS9P46781 194 aaKnown RBP8.6□□□□□ -1.03
GABPB1-205ENST00000429662 GSK3BP49841 420 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 POLR2JP52435 117 aaKnown RBP8.6□□□□□ -1.03
GABPB1-205ENST00000429662 ZNF140P52738 457 aaPredicted RBP8.6□□□□□ -1.03
GABPB1-205ENST00000429662 TIAL1Q01085 375 aaKnown RBP eCLIP8.6□□□□□ -1.03
GABPB1-205ENST00000429662 LIPEQ05469 1076 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 EFEMP1Q12805 493 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 GRSF1Q12849 480 aaKnown RBP eCLIP8.6□□□□□ -1.03
GABPB1-205ENST00000429662 PRKG2Q13237 762 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 TUBA3CQ13748 450 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 GRB7Q14451 532 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 CRY1Q16526 586 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 ALFQ53S48 1182 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 CCNYL2Q5T2Q4 361 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 GLB1LQ6UWU2 654 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 RNF165Q6ZSG1 346 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 GPRIN3Q6ZVF9 776 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 TFAP2DQ7Z6R9 452 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 GPR180Q86V85 440 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 PIM3Q86V86 326 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 HID1Q8IV36 788 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 CMTR2Q8IYT2 770 aaKnown RBP8.6□□□□□ -1.03
GABPB1-205ENST00000429662 PGBD5Q8N414 524 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 FBXL6Q8N531 539 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 PDPRQ8NCN5 879 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 C2orf15Q8WU43 125 aaKnown RBP8.6□□□□□ -1.03
GABPB1-205ENST00000429662 FBXO32Q969P5 355 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 NRBF2Q96F24 287 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 PDLIM5Q96HC4 596 aaKnown RBP8.6□□□□□ -1.03
GABPB1-205ENST00000429662 RPRD1AQ96P16 312 aaPredicted RBP8.6□□□□□ -1.03
GABPB1-205ENST00000429662 TRIB3Q96RU7 358 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 ZNF382Q96SR6 550 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 DOK1Q99704 481 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 ADAM2Q99965 735 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 C19orf43Q9BQ61 176 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 C17orf80Q9BSJ5 609 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 HGH1Q9BTY7 390 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 LRRC3Q9BY71 257 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 TUBB1Q9H4B7 451 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 PDFQ9HBH1 243 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 MAGEE1Q9HCI5 957 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.6□□□□□ -1.03
GABPB1-205ENST00000429662 SMOXQ9NWM0 555 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 ABI2Q9NYB9 513 aaPredicted RBP8.6□□□□□ -1.03
GABPB1-205ENST00000429662 NUDT4Q9NZJ9 180 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 MARCH2Q9P0N8 246 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 FAF1Q9UNN5 650 aaPredicted RBP8.6□□□□□ -1.03
GABPB1-205ENST00000429662 FADS3Q9Y5Q0 445 aa8.6□□□□□ -1.03
GABPB1-205ENST00000429662 SLC12A8A0AV02 714 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 OR51F1A6NGY5 319 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 C16orf96A6NNT2 1141 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 DLGAP1O14490 977 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 ACOX3O15254 700 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 INPP4BO15327 924 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 DEAF1O75398 565 aaPredicted RBP8.59□□□□□ -1.03
GABPB1-205ENST00000429662 ECI2O75521 394 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 DNAJB5O75953 348 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 BAIAP3O94812 1187 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 CTSHP09668 335 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 LINC00271P0C7V0 271 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 LINC00032P0C843 101 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 SPATA31D3P0C874 917 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 CDH1P12830 882 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 PKMP14618 531 aaKnown RBP8.59□□□□□ -1.03
GABPB1-205ENST00000429662 JUNBP17275 347 aaPredicted RBP8.59□□□□□ -1.03
GABPB1-205ENST00000429662 TSPAN8P19075 237 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 TACR2P21452 398 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 LPOP22079 712 aaPredicted RBP8.59□□□□□ -1.03
GABPB1-205ENST00000429662 DCKP27707 260 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 ETFBP38117 255 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 THPOP40225 353 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 ID4P47928 161 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 HLCSP50747 726 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 IL2P60568 153 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 DSC1Q08554 894 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 MAD2L1Q13257 205 aaPredicted RBP8.59□□□□□ -1.03
GABPB1-205ENST00000429662 TOP3AQ13472 1001 aaPredicted RBP8.59□□□□□ -1.03
GABPB1-205ENST00000429662 PAN2Q504Q3 1202 aaKnown RBP8.59□□□□□ -1.03
GABPB1-205ENST00000429662 ATP6AP1LQ52LC2 224 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 RBM48Q5RL73 367 aaKnown RBP8.59□□□□□ -1.03
GABPB1-205ENST00000429662 RAP1GAP2Q684P5 730 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 METTL2BQ6P1Q9 378 aaKnown RBP8.59□□□□□ -1.03
GABPB1-205ENST00000429662 PAQR3Q6TCH7 311 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 SPATA31D4Q6ZUB0 917 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 USP51Q70EK9 711 aa8.59□□□□□ -1.03
GABPB1-205ENST00000429662 RPS27LQ71UM5 84 aaKnown RBP8.59□□□□□ -1.03
GABPB1-205ENST00000429662 LDB1Q86U70 411 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms