RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 PLPP4Q5VZY2 271 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 ZDHHC24Q6UX98 284 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 TDRPQ86YL5 185 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 ZZZ3Q8IYH5 903 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 PYROXD2Q8N2H3 581 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 SSU72Q9NP77 194 aaKnown RBP14.33□□□□□ -0.12
PTPRU-204ENST00000428026 SLC17A6Q9P2U8 582 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 SRRDQ9UH36 339 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 MRPS23Q9Y3D9 190 aaKnown RBP14.33□□□□□ -0.12
PTPRU-204ENST00000428026 FADS2P1A8MWK0 482 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 CST3P01034 146 aaPredicted RBP14.33□□□□□ -0.12
PTPRU-204ENST00000428026 HSPA7P48741 367 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 C12orf50Q8NA57 414 aaPredicted RBP14.33□□□□□ -0.12
PTPRU-204ENST00000428026 DUSP16Q9BY84 665 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 HSD3B7Q9H2F3 369 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 MUC13Q9H3R2 512 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 AKAP7Q9P0M2 348 aaPredicted RBP14.33□□□□□ -0.12
PTPRU-204ENST00000428026 IKZF2Q9UKS7 526 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 A0A0X1KG70 313 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 ACSL4O60488 711 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 SCN2BO60939 215 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 ADH1AP07327 375 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 SKP1P63208 163 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 FBXO42Q6P3S6 717 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 IFNLR1Q8IU57 520 aaPredicted RBP14.33□□□□□ -0.12
PTPRU-204ENST00000428026 COMMD3Q9UBI1 195 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 MID1O15344 667 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 TPST2O60704 377 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 RPP40O75818 363 aaKnown RBP14.33□□□□□ -0.12
PTPRU-204ENST00000428026 PRKD3O94806 890 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 OR4F21O95013 312 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 PKMP14618 531 aaKnown RBP14.33□□□□□ -0.12
PTPRU-204ENST00000428026 CXCR3P49682 368 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 GRB14Q14449 540 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 GPR153Q6NV75 609 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 USP30Q70CQ3 517 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 FSTL5Q8N475 847 aaPredicted RBP14.33□□□□□ -0.12
PTPRU-204ENST00000428026 GRPEL2Q8TAA5 225 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 SKA1Q96BD8 255 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 LHX5Q9H2C1 402 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 MFSD1Q9H3U5 465 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 TXNRD2Q9NNW7 524 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 EIF3KQ9UBQ5 218 aaKnown RBP14.33□□□□□ -0.12
PTPRU-204ENST00000428026 ASF1AQ9Y294 204 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 ATRNL1Q5VV63 1379 aa14.33□□□□□ -0.12
PTPRU-204ENST00000428026 A0A075B6Q4 140 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 PRLP01236 227 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 RPLP0P05388 317 aaKnown RBP14.32□□□□□ -0.12
PTPRU-204ENST00000428026 MERTKQ12866 999 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 DLG1Q12959 904 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 TMPRSS11BQ86T26 416 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 LAPTM4BQ86VI4 370 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 HEXDCQ8WVB3 486 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 AHCYL2Q96HN2 611 aaKnown RBP14.32□□□□□ -0.12
PTPRU-204ENST00000428026 GOLGA2P5Q9HBQ8 144 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 IFNA6P05013 189 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 F7P08709 466 aaPredicted RBP14.32□□□□□ -0.12
PTPRU-204ENST00000428026 SAGP10523 405 aaPredicted RBP14.32□□□□□ -0.12
PTPRU-204ENST00000428026 SMARCB1Q12824 385 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 ADGRG2Q8IZP9 1017 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 CRYBG2Q8N1P7 616 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 PIK3R3Q92569 461 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 EBPLQ9BY08 206 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 CARD8Q9Y2G2 431 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 ADRA1BP35368 520 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 PLEKHG4Q58EX7 1191 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 ESRP1Q6NXG1 681 aaKnown RBP14.32□□□□□ -0.12
PTPRU-204ENST00000428026 ERI1Q8IV48 349 aaKnown RBP14.32□□□□□ -0.12
PTPRU-204ENST00000428026 LIX1Q8N485 282 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 CXorf40AQ8TE69 158 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 ZNF358Q9NW07 568 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 GPSM3Q9Y4H4 160 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 ACRP10323 421 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 PPM1AP35813 382 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 THOP1P52888 689 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 SYT16Q17RD7 645 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 FOXR2Q6PJQ5 311 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 ZDHHC21Q8IVQ6 265 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 ZNF567Q8N184 647 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 POP5Q969H6 163 aaKnown RBP14.32□□□□□ -0.12
PTPRU-204ENST00000428026 GMLQ99445 158 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 ASAH2Q9NR71 780 aa14.32□□□□□ -0.12
PTPRU-204ENST00000428026 COL1A2P08123 1366 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 IRGMA1A4Y4 181 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 CXCR6O00574 342 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 TULP3O75386 442 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 SLC25A12O75746 678 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 ATF6P18850 670 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 IRF9Q00978 393 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 PABPC1LQ4VXU2 614 aaKnown RBP14.31□□□□□ -0.12
PTPRU-204ENST00000428026 GCNT6Q5T4J0 391 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 DCLRE1AQ6PJP8 1040 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 SLC24A5Q71RS6 500 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 OAFQ86UD1 273 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 ZFP3Q96NJ6 502 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 ATG10Q9H0Y0 220 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 NEK6Q9HC98 313 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 GRIP1Q9Y3R0 1128 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 FAM86C2PA6NEL3 165 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 ISM1B1AKI9 464 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms