RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ZBTB18Q99592 522 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 FEM1AQ9BSK4 669 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 C9orf16Q9BUW7 83 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 HIPK3Q9H422 1215 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 ASB8Q9H765 288 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 POLE4Q9NR33 117 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 ADGRE2Q9UHX3 823 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 CRLS1Q9UJA2 301 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 RAI2Q9Y5P3 530 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 SNX5Q9Y5X3 404 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 H3BNH8 94 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 hCG_2039718K7EN88 272 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 LDB2O43679 373 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 TBC1D4O60343 1298 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 SCAPQ12770 1279 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 TRIM60Q495X7 471 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 FAM180BQ6P0A1 224 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 LARP4Q71RC2 724 aaKnown RBP eCLIP13.2□□□□□ -0.3
USP42-203ENST00000426246 IMP4Q96G21 291 aaKnown RBP13.2□□□□□ -0.3
USP42-203ENST00000426246 BBS2Q9BXC9 721 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 RUBCNLQ9H714 662 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 RPF2Q9H7B2 306 aaKnown RBP13.2□□□□□ -0.3
USP42-203ENST00000426246 SYTL2Q9HCH5 934 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 SUCOQ9UBS9 1254 aaKnown RBP13.2□□□□□ -0.3
USP42-203ENST00000426246 TBX21Q9UL17 535 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 ASCC3Q8N3C0 2202 aaKnown RBP13.2□□□□□ -0.3
USP42-203ENST00000426246 RPP40O75818 363 aaKnown RBP13.2□□□□□ -0.3
USP42-203ENST00000426246 VNN2O95498 520 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 ITPKAP23677 461 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 PBLDP30039 288 aaPredicted RBP13.2□□□□□ -0.3
USP42-203ENST00000426246 OR1D2P34982 312 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 HK2P52789 917 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 RAD23AP54725 363 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 CCL23P55773 120 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 PRKG2Q13237 762 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 MAPRE1Q15691 268 aaKnown RBP13.2□□□□□ -0.3
USP42-203ENST00000426246 BRMS1LQ5PSV4 323 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 ZDHHC13Q8IUH4 622 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 SEPT8Q92599 483 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 TMBIM1Q969X1 311 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 ITM2CQ9NQX7 267 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 TBC1D23Q9NUY8 699 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 IFT80Q9P2H3 777 aaPredicted RBP13.2□□□□□ -0.3
USP42-203ENST00000426246 AGO1Q9UL18 857 aaKnown RBP13.2□□□□□ -0.3
USP42-203ENST00000426246 PCDHB7Q9Y5E2 793 aa13.2□□□□□ -0.3
USP42-203ENST00000426246 ZFC3H1O60293 1989 aaKnown RBP13.19□□□□□ -0.3
USP42-203ENST00000426246 GPX3P22352 226 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 AKT1P31749 480 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 MAGEA12P43365 314 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 SLC11A1P49279 550 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 PYCR3Q53H96 274 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 ANKRD26P1Q6NSI1 321 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 KDELC1Q6UW63 502 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 ENPP6Q6UWR7 440 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 ABRAXAS1Q6UWZ7 409 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 RSPO2Q6UXX9 243 aaPredicted RBP13.19□□□□□ -0.3
USP42-203ENST00000426246 ERMP1Q7Z2K6 904 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 IRGQQ8WZA9 623 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 RANBP9Q96S59 729 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 DPY30Q9C005 99 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 MEAF6Q9HAF1 191 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 TLR8Q9NR97 1041 aaKnown RBP13.19□□□□□ -0.3
USP42-203ENST00000426246 TRNAU1APQ9NX07 287 aaKnown RBP13.19□□□□□ -0.3
USP42-203ENST00000426246 SMPD3Q9NY59 655 aaPredicted RBP13.19□□□□□ -0.3
USP42-203ENST00000426246 BCL10O95999 233 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 HSMCR30P0CW71 290 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 TACR2P21452 398 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 FMO3P31513 532 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 LEPRP48357 1165 aaKnown RBP13.19□□□□□ -0.3
USP42-203ENST00000426246 HCAR3P49019 387 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 CLCN2P51788 898 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 ZXDBP98169 803 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 RAB39AQ14964 217 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 NR1D2Q14995 579 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 C11orf91Q3C1V1 193 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 RFTN2Q52LD8 501 aaPredicted RBP13.19□□□□□ -0.3
USP42-203ENST00000426246 ITIH5Q86UX2 942 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 SPATA17Q96L03 361 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 CLPBQ9H078 707 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 RANBP2P49792 3224 aaKnown RBP13.19□□□□□ -0.3
USP42-203ENST00000426246 SYN3O14994 580 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 PRAMEF12O95522 483 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 OCM2P0CE71 109 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 OCMP0CE72 109 aaPredicted RBP13.19□□□□□ -0.3
USP42-203ENST00000426246 AGXTP21549 392 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 CYP2C18P33260 490 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 CDH18Q13634 790 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 MAPKAPK3Q16644 382 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 NHSL2Q5HYW2 709 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 CHERPQ8IWX8 916 aaKnown RBP13.19□□□□□ -0.3
USP42-203ENST00000426246 C2orf73Q8N5S3 287 aaPredicted RBP13.19□□□□□ -0.3
USP42-203ENST00000426246 DDHD1Q8NEL9 900 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 OR56A4Q8NGH8 313 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 CENPNQ96H22 339 aaPredicted RBP13.19□□□□□ -0.3
USP42-203ENST00000426246 HAPLN3Q96S86 360 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 CRISPLD1Q9H336 500 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 ZNF451Q9Y4E5 1061 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 CHD7Q9P2D1 2997 aa13.19□□□□□ -0.3
USP42-203ENST00000426246 SLC7A4O43246 635 aa13.18□□□□□ -0.3
USP42-203ENST00000426246 PKMP14618 531 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms