RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 GOLGA8TH3BQL2 631 aa22.65■■□□□ 1.22
SMARCB1-205ENST00000417137 TP73O15350 636 aa22.65■■□□□ 1.22
SMARCB1-205ENST00000417137 HYAL3O43820 417 aaPredicted RBP22.65■■□□□ 1.22
SMARCB1-205ENST00000417137 JUPP14923 745 aa22.65■■□□□ 1.22
SMARCB1-205ENST00000417137 HHEXQ03014 270 aa22.65■■□□□ 1.22
SMARCB1-205ENST00000417137 PDIA2Q13087 525 aaKnown RBP22.65■■□□□ 1.22
SMARCB1-205ENST00000417137 CBLBQ13191 982 aa22.65■■□□□ 1.22
SMARCB1-205ENST00000417137 CRYMQ14894 314 aa22.65■■□□□ 1.22
SMARCB1-205ENST00000417137 TMPRSS7Q7RTY8 843 aa22.65■■□□□ 1.22
SMARCB1-205ENST00000417137 ZNF438Q7Z4V0 828 aa22.65■■□□□ 1.22
SMARCB1-205ENST00000417137 CACTIN-AS1Q8N1I8 211 aa22.65■■□□□ 1.22
SMARCB1-205ENST00000417137 Q8N9G6 341 aaPredicted RBP22.65■■□□□ 1.22
SMARCB1-205ENST00000417137 PWWP2AQ96N64 755 aa22.65■■□□□ 1.22
SMARCB1-205ENST00000417137 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.65■■□□□ 1.22
SMARCB1-205ENST00000417137 CPNE7Q9UBL6 633 aa22.65■■□□□ 1.22
SMARCB1-205ENST00000417137 PPM1DO15297 605 aa22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 EIF3HO15372 352 aaKnown RBP eCLIP22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 BANF1O75531 89 aa22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 VIPP01282 170 aa22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 ALDH4A1P30038 563 aa22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 PLTPP55058 493 aa22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 INSM1Q01101 510 aaPredicted RBP22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 SLC7A5Q01650 507 aa22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 PLOD1Q02809 727 aaPredicted RBP22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 RPA4Q13156 261 aa22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 TYSND1Q2T9J0 566 aa22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 PTRHD1Q6GMV3 140 aaKnown RBP22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 FAM83HQ6ZRV2 1179 aaPredicted RBP22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 CILP2Q8IUL8 1156 aa22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 ART4Q93070 314 aa22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 CXorf40BQ96DE9 158 aa22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 SLC38A3Q99624 504 aa22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 FAM167BQ9BTA0 163 aa22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 CARD6Q9BX69 1037 aa22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 INTS10Q9NVR2 710 aaKnown RBP22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 GRHL1Q9NZI5 618 aa22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 SCHIP1Q9P0W5 487 aaPredicted RBP22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 FAM8A1Q9UBU6 413 aa22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 GNPTGQ9UJJ9 305 aa22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 CHMP2BQ9UQN3 213 aa22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 TEX264Q9Y6I9 313 aa22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 PLXNB3Q9ULL4 1909 aa22.64■■□□□ 1.21
SMARCB1-205ENST00000417137 UBA6A0AVT1 1052 aaPredicted RBP22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 E7ESA3 106 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 LIN7AO14910 233 aaPredicted RBP22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 TCEA3O75764 348 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 MT-CO3P00414 261 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 SLC35G4P0C7Q5 338 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 BRAFP15056 766 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 RPS3P23396 243 aaKnown RBP eCLIP22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 NR1D2Q14995 579 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 HP1BP3Q5SSJ5 553 aaPredicted RBP22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 HES3Q5TGS1 186 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 ZNF470Q6ECI4 717 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 KCNMB4Q86W47 210 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 IGDCC3Q8IVU1 814 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 RBM12BQ8IXT5 1001 aaKnown RBP22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 ELMO1Q92556 727 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 PANX3Q96QZ0 392 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 FOXP3Q9BZS1 431 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 LRRN3Q9H3W5 708 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 COG4Q9H9E3 785 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 EPB41L5Q9HCM4 733 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 POT1Q9NUX5 634 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 RABGEF1Q9UJ41 708 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 ANGPTL2Q9UKU9 493 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 PSMD13Q9UNM6 376 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 CLCA2Q9UQC9 943 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 WDR37Q9Y2I8 494 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 PCDHB1Q9Y5F3 818 aa22.63■■□□□ 1.21
SMARCB1-205ENST00000417137 H3BMM5 538 aa22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 RPLP0P05388 317 aaKnown RBP22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 SLC19A1P41440 591 aa22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 ADARP55265 1226 aaKnown RBP22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 UBE2IP63279 158 aaKnown RBP22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 CCL7P80098 99 aa22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 SHC2P98077 582 aa22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 GUCY2DQ02846 1103 aa22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 SPIDRQ14159 915 aa22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 CLCA4Q14CN2 919 aa22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 DNTTIP2Q5QJE6 756 aaKnown RBP22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 SPRED1Q7Z699 444 aa22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 CFAP36Q96G28 342 aa22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 GFM1Q96RP9 751 aaKnown RBP22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 SCNM1Q9BWG6 230 aa22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 WWP1Q9H0M0 922 aa22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 P2RY12Q9H244 342 aa22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 SYNDIG1Q9H7V2 258 aa22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 UCK1Q9HA47 277 aa22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 KCNK4Q9NYG8 393 aa22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 IL1RAPL1Q9NZN1 696 aa22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 ZNF624Q9P2J8 865 aaPredicted RBP22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 GOLGA4Q13439 2230 aaKnown RBP22.62■■□□□ 1.21
SMARCB1-205ENST00000417137 IFRD1O00458 451 aaPredicted RBP22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 KPNA5O15131 536 aa22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 ESR1P03372 595 aa22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 EIF3BP55884 814 aaKnown RBP22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 RPE65Q16518 533 aa22.61■■□□□ 1.21
SMARCB1-205ENST00000417137 CLPPQ16740 277 aaPredicted RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms