RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 HPCAL1P37235 193 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 GP2P55259 537 aaKnown RBP17.4■□□□□ 0.38
SDCBP-202ENST00000413219 TBX4P57082 545 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 KCNAB2Q13303 367 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 IRF5Q13568 498 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 FBXO48Q5FWF7 155 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 CYP20A1Q6UW02 462 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 SPATA2LQ8IUW3 424 aaPredicted RBP17.4■□□□□ 0.38
SDCBP-202ENST00000413219 OR2T12Q8NG77 320 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 LPPQ93052 612 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 POP5Q969H6 163 aaKnown RBP17.4■□□□□ 0.38
SDCBP-202ENST00000413219 GPR21Q99679 349 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 ACTL8Q9H568 366 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 MTRRQ9UBK8 725 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 AP3M1Q9Y2T2 418 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 TMED5Q9Y3A6 229 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 NEUROG3Q9Y4Z2 214 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 ST14Q9Y5Y6 855 aa17.4■□□□□ 0.38
SDCBP-202ENST00000413219 PTPRDP23468 1912 aa17.39■□□□□ 0.38
SDCBP-202ENST00000413219 HTR3EA5X5Y0 456 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 ENPP3O14638 875 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 GSTA4O15217 222 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 NDUFS3O75489 264 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 NDST3O95803 873 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 PSMA3P25788 255 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 HOXC8P31273 242 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 PIGAP37287 484 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 EIF2B2P49770 351 aaKnown RBP17.39■□□□□ 0.37
SDCBP-202ENST00000413219 ZNF140P52738 457 aaPredicted RBP17.39■□□□□ 0.37
SDCBP-202ENST00000413219 ISL1P61371 349 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 SERINC3Q13530 473 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 RFX4Q33E94 735 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 ZC3H12BQ5HYM0 836 aaKnown RBP17.39■□□□□ 0.37
SDCBP-202ENST00000413219 ZNF691Q5VV52 312 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 OVOS1Q6IE37 1185 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 LAIR2Q6ISS4 152 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 AGMOQ6ZNB7 445 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 GPSM1Q86YR5 675 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 CDYL2Q8N8U2 506 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 OR5K1Q8NHB7 308 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 FBLIM1Q8WUP2 373 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 SLC47A1Q96FL8 570 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 DGCR6LQ9BY27 220 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 CARS2Q9HA77 564 aaKnown RBP17.39■□□□□ 0.37
SDCBP-202ENST00000413219 NECTIN3Q9NQS3 549 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 SLC45A1Q9Y2W3 748 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 FAM32AQ9Y421 112 aaKnown RBP17.39■□□□□ 0.37
SDCBP-202ENST00000413219 DGKBQ9Y6T7 804 aa17.39■□□□□ 0.37
SDCBP-202ENST00000413219 LOC100130705A0A1B0GUX0 176 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 SLC16A6O15403 523 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 AQP9O43315 295 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 RAMP2O60895 175 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 VPS26AO75436 327 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 JRKO75564 520 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 SCELO95171 688 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 BRCC3P46736 316 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 YBEYP58557 167 aaPredicted RBP17.38■□□□□ 0.37
SDCBP-202ENST00000413219 GALNT3Q14435 633 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 LDLRAP1Q5SW96 308 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 AGAP7PQ5VUJ5 663 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 ALG1LQ6GMV1 187 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 RBM23Q86U06 439 aaKnown RBP17.38■□□□□ 0.37
SDCBP-202ENST00000413219 TLK2Q86UE8 772 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 MON1AQ86VX9 555 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 ATP6V0D2Q8N8Y2 350 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 ZNF548Q8NEK5 533 aaPredicted RBP17.38■□□□□ 0.37
SDCBP-202ENST00000413219 C17orf80Q9BSJ5 609 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 FBXO8Q9NRD0 319 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 EIF2B4Q9UI10 523 aaKnown RBP17.38■□□□□ 0.37
SDCBP-202ENST00000413219 ST3GAL5Q9UNP4 418 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 SLC27A5Q9Y2P5 690 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 NLRC5Q86WI3 1866 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 NCF1BA6NI72 391 aaPredicted RBP17.38■□□□□ 0.37
SDCBP-202ENST00000413219 NCF1CA8MVU1 366 aaPredicted RBP17.38■□□□□ 0.37
SDCBP-202ENST00000413219 PDHXO00330 501 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 B3GAT3O94766 335 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 TSPAN12O95859 305 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 G6PDP11413 515 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 NCF1P14598 390 aaPredicted RBP17.38■□□□□ 0.37
SDCBP-202ENST00000413219 MSH3P20585 1137 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 HOXD12P35452 270 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 ERVPABLB-1P60509 514 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 ZNF235Q14590 738 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 NKG7Q16617 165 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 CD300LGQ6UXG3 332 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 MRPL10Q7Z7H8 261 aaKnown RBP17.38■□□□□ 0.37
SDCBP-202ENST00000413219 ADHFE1Q8IWW8 467 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 FAM86B1Q8N7N1 296 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 FIG4Q92562 907 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 TRIB3Q96RU7 358 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 KATNAL1Q9BW62 490 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 MAGIXQ9H6Y5 334 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 ACTR8Q9H981 624 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 ADGRE2Q9UHX3 823 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 SCML2Q9UQR0 700 aa17.38■□□□□ 0.37
SDCBP-202ENST00000413219 DRGXA6NNA5 263 aa17.37■□□□□ 0.37
SDCBP-202ENST00000413219 M0QX08 132 aa17.37■□□□□ 0.37
SDCBP-202ENST00000413219 GNGT2O14610 69 aa17.37■□□□□ 0.37
SDCBP-202ENST00000413219 PRAMEF11O60813 436 aa17.37■□□□□ 0.37
SDCBP-202ENST00000413219 INMTO95050 263 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms