RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 CRY1Q16526 586 aa25.23■■□□□ 1.63
COL13A1-203ENST00000398969 TMEM214Q6NUQ4 689 aaKnown RBP25.23■■□□□ 1.63
COL13A1-203ENST00000398969 DTWD1Q8N5C7 304 aa25.23■■□□□ 1.63
COL13A1-203ENST00000398969 EFHBQ8N7U6 833 aa25.23■■□□□ 1.63
COL13A1-203ENST00000398969 SARS2Q9NP81 518 aaKnown RBP25.23■■□□□ 1.63
COL13A1-203ENST00000398969 TLR9Q9NR96 1032 aa25.23■■□□□ 1.63
COL13A1-203ENST00000398969 NUDT4Q9NZJ9 180 aa25.23■■□□□ 1.63
COL13A1-203ENST00000398969 E5RI56 91 aa25.22■■□□□ 1.63
COL13A1-203ENST00000398969 G6PDP11413 515 aa25.22■■□□□ 1.63
COL13A1-203ENST00000398969 MTPNP58546 118 aa25.22■■□□□ 1.63
COL13A1-203ENST00000398969 GPNMBQ14956 572 aa25.22■■□□□ 1.63
COL13A1-203ENST00000398969 OTUD3Q5T2D3 398 aaPredicted RBP25.22■■□□□ 1.63
COL13A1-203ENST00000398969 IL27RAQ6UWB1 636 aa25.22■■□□□ 1.63
COL13A1-203ENST00000398969 RNF19BQ6ZMZ0 732 aa25.22■■□□□ 1.63
COL13A1-203ENST00000398969 FAM126BQ8IXS8 530 aa25.22■■□□□ 1.63
COL13A1-203ENST00000398969 METTL6Q8TCB7 284 aa25.22■■□□□ 1.63
COL13A1-203ENST00000398969 GIPC2Q8TF65 315 aa25.22■■□□□ 1.63
COL13A1-203ENST00000398969 GPR62Q9BZJ7 368 aa25.22■■□□□ 1.63
COL13A1-203ENST00000398969 TMEM161AQ9NX61 479 aa25.22■■□□□ 1.63
COL13A1-203ENST00000398969 IFT80Q9P2H3 777 aaPredicted RBP25.22■■□□□ 1.63
COL13A1-203ENST00000398969 PCDHGA11Q9Y5H2 935 aa25.22■■□□□ 1.63
COL13A1-203ENST00000398969 UPK1AO00322 258 aa25.21■■□□□ 1.63
COL13A1-203ENST00000398969 ARNTLO00327 626 aa25.21■■□□□ 1.63
COL13A1-203ENST00000398969 TULP3O75386 442 aa25.21■■□□□ 1.63
COL13A1-203ENST00000398969 ALBP02768 609 aa25.21■■□□□ 1.63
COL13A1-203ENST00000398969 ARL1P40616 181 aaPredicted RBP25.21■■□□□ 1.63
COL13A1-203ENST00000398969 PTPRRQ15256 657 aa25.21■■□□□ 1.63
COL13A1-203ENST00000398969 ELMSAN1Q6PJG2 1045 aa25.21■■□□□ 1.63
COL13A1-203ENST00000398969 CYP20A1Q6UW02 462 aa25.21■■□□□ 1.63
COL13A1-203ENST00000398969 RSPO2Q6UXX9 243 aaPredicted RBP25.21■■□□□ 1.63
COL13A1-203ENST00000398969 TMEM26Q6ZUK4 368 aa25.21■■□□□ 1.63
COL13A1-203ENST00000398969 CHST15Q7LFX5 561 aaPredicted RBP25.21■■□□□ 1.63
COL13A1-203ENST00000398969 HBEGFQ99075 208 aa25.21■■□□□ 1.63
COL13A1-203ENST00000398969 CGREF1Q99674 301 aa25.21■■□□□ 1.63
COL13A1-203ENST00000398969 IRAK4Q9NWZ3 460 aa25.21■■□□□ 1.63
COL13A1-203ENST00000398969 ANKRD66B4E2M5 251 aa25.21■■□□□ 1.63
COL13A1-203ENST00000398969 F11P03951 625 aa25.21■■□□□ 1.63
COL13A1-203ENST00000398969 C18orf21Q32NC0 220 aaPredicted RBP25.21■■□□□ 1.63
COL13A1-203ENST00000398969 TERB1Q8NA31 727 aa25.21■■□□□ 1.63
COL13A1-203ENST00000398969 NUDT8Q8WV74 236 aa25.21■■□□□ 1.63
COL13A1-203ENST00000398969 ANKRD12Q6UB98 2062 aa25.21■■□□□ 1.63
COL13A1-203ENST00000398969 IQCF5A8MTL0 148 aa25.2■■□□□ 1.63
COL13A1-203ENST00000398969 ANKRD28O15084 1053 aa25.2■■□□□ 1.63
COL13A1-203ENST00000398969 LSM1O15116 133 aaKnown RBP25.2■■□□□ 1.63
COL13A1-203ENST00000398969 STX7O15400 261 aaKnown RBP25.2■■□□□ 1.63
COL13A1-203ENST00000398969 PRSS23O95084 383 aa25.2■■□□□ 1.63
COL13A1-203ENST00000398969 ARSFP54793 590 aa25.2■■□□□ 1.63
COL13A1-203ENST00000398969 GPR17Q13304 367 aa25.2■■□□□ 1.63
COL13A1-203ENST00000398969 BFSP2Q13515 415 aa25.2■■□□□ 1.63
COL13A1-203ENST00000398969 DBF4BQ8NFT6 615 aa25.2■■□□□ 1.63
COL13A1-203ENST00000398969 ABTB1Q969K4 478 aaPredicted RBP25.2■■□□□ 1.63
COL13A1-203ENST00000398969 MUS81Q96NY9 551 aa25.2■■□□□ 1.63
COL13A1-203ENST00000398969 COMMD8Q9NX08 183 aa25.2■■□□□ 1.63
COL13A1-203ENST00000398969 MAGEB3O15480 346 aa25.2■■□□□ 1.62
COL13A1-203ENST00000398969 ESR1P03372 595 aa25.2■■□□□ 1.62
COL13A1-203ENST00000398969 COL6A1P12109 1028 aa25.2■■□□□ 1.62
COL13A1-203ENST00000398969 ALDH3A2P51648 485 aa25.2■■□□□ 1.62
COL13A1-203ENST00000398969 CLCN7P51798 805 aa25.2■■□□□ 1.62
COL13A1-203ENST00000398969 DGKQP52824 942 aa25.2■■□□□ 1.62
COL13A1-203ENST00000398969 PCBP2Q15366 365 aaKnown RBP eCLIP25.2■■□□□ 1.62
COL13A1-203ENST00000398969 NEDD8Q15843 81 aa25.2■■□□□ 1.62
COL13A1-203ENST00000398969 GOLGA7Q7Z5G4 137 aa25.2■■□□□ 1.62
COL13A1-203ENST00000398969 TTC30BQ8N4P2 665 aa25.2■■□□□ 1.62
COL13A1-203ENST00000398969 PDPRQ8NCN5 879 aa25.2■■□□□ 1.62
COL13A1-203ENST00000398969 PNPT1Q8TCS8 783 aaKnown RBP25.2■■□□□ 1.62
COL13A1-203ENST00000398969 NAA50Q9GZZ1 169 aaKnown RBP25.2■■□□□ 1.62
COL13A1-203ENST00000398969 RETREG1Q9H6L5 497 aa25.2■■□□□ 1.62
COL13A1-203ENST00000398969 NEUROG3Q9Y4Z2 214 aa25.2■■□□□ 1.62
COL13A1-203ENST00000398969 COMMD10Q9Y6G5 202 aa25.2■■□□□ 1.62
COL13A1-203ENST00000398969 A0A0U1RQS6 177 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 A0A1W2PPW3 197 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 SH3PXD2BA1X283 911 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 OR7A17O14581 309 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 DEAF1O75398 565 aaPredicted RBP25.19■■□□□ 1.62
COL13A1-203ENST00000398969 RAP2AP10114 183 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 PTGER3P43115 390 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 DUSP4Q13115 394 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 C16orf72Q14CZ0 275 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 NR6A1Q15406 480 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 AAK1Q2M2I8 961 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 ZIK1Q3SY52 487 aaPredicted RBP25.19■■□□□ 1.62
COL13A1-203ENST00000398969 AARS2Q5JTZ9 985 aaKnown RBP25.19■■□□□ 1.62
COL13A1-203ENST00000398969 ITFG1Q8TB96 612 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 TMBIM1Q969X1 311 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 ADGRE3Q9BY15 652 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 LMCD1Q9NZU5 365 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 DNMT3LQ9UJW3 386 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 POLR3HQ9Y535 204 aaPredicted RBP25.19■■□□□ 1.62
COL13A1-203ENST00000398969 TRIM64BA6NI03 449 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 CBX4O00257 560 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 GPR39O43194 453 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 RSL1D1O76021 490 aaKnown RBP25.19■■□□□ 1.62
COL13A1-203ENST00000398969 CPNE6O95741 557 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 ANXA6P08133 673 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 RHOCP08134 193 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 GGT1P19440 569 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 ELK4P28324 431 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 POLR2IP36954 125 aaKnown RBP25.19■■□□□ 1.62
COL13A1-203ENST00000398969 SLC11A2P49281 568 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 PWP1Q13610 501 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms