RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 WDR37Q9Y2I8 494 aa18.79■□□□□ 0.6
CBWD3-204ENST00000377349 PCDHA3Q9Y5H8 950 aa18.79■□□□□ 0.6
CBWD3-204ENST00000377349 CCDC88CQ9P219 2028 aa18.79■□□□□ 0.6
CBWD3-204ENST00000377349 LOC285095A0A1B0GVY8 99 aa18.78■□□□□ 0.6
CBWD3-204ENST00000377349 VEGFDO43915 354 aa18.78■□□□□ 0.6
CBWD3-204ENST00000377349 KIAA0754O94854 1291 aa18.78■□□□□ 0.6
CBWD3-204ENST00000377349 TIAF1O95411 115 aa18.78■□□□□ 0.6
CBWD3-204ENST00000377349 AGTP01019 485 aa18.78■□□□□ 0.6
CBWD3-204ENST00000377349 AMD1P17707 334 aa18.78■□□□□ 0.6
CBWD3-204ENST00000377349 HLA-DPA1P20036 260 aa18.78■□□□□ 0.6
CBWD3-204ENST00000377349 PBLDP30039 288 aaPredicted RBP18.78■□□□□ 0.6
CBWD3-204ENST00000377349 VAV2P52735 878 aa18.78■□□□□ 0.6
CBWD3-204ENST00000377349 DRG2P55039 364 aaKnown RBP18.78■□□□□ 0.6
CBWD3-204ENST00000377349 COPS2P61201 443 aa18.78■□□□□ 0.6
CBWD3-204ENST00000377349 PPP1CAP62136 330 aa18.78■□□□□ 0.6
CBWD3-204ENST00000377349 IL11RAQ14626 422 aa18.78■□□□□ 0.6
CBWD3-204ENST00000377349 TMEM135Q86UB9 458 aa18.78■□□□□ 0.6
CBWD3-204ENST00000377349 GAS2L3Q86XJ1 694 aa18.78■□□□□ 0.6
CBWD3-204ENST00000377349 GBA3Q9H227 469 aa18.78■□□□□ 0.6
CBWD3-204ENST00000377349 TRABDQ9H4I3 376 aa18.78■□□□□ 0.6
CBWD3-204ENST00000377349 SEMA5BQ9P283 1151 aa18.78■□□□□ 0.6
CBWD3-204ENST00000377349 EPHA6Q9UF33 1036 aa18.78■□□□□ 0.6
CBWD3-204ENST00000377349 PACSIN2Q9UNF0 486 aaPredicted RBP18.78■□□□□ 0.6
CBWD3-204ENST00000377349 KCTD3Q9Y597 815 aa18.78■□□□□ 0.6
CBWD3-204ENST00000377349 GLYATL1P3A0A0U1RQE8 302 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 CCDC66A2RUB6 948 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 PJA2O43164 708 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 UGT1A9O60656 530 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 RBP3P10745 1247 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 UGT1A6P19224 532 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 UGT1A1P22309 533 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 UGT1A4P22310 534 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 PSMB4P28070 264 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 AKT1P31749 480 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 CA5AP35218 305 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 HMGCLP35914 325 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 GEMP55040 296 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 XRCC4Q13426 336 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 OLIG2Q13516 323 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 PRPSAP1Q14558 356 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 PTPRCAPQ14761 206 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 CHRNA6Q15825 494 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 PEX26Q7Z412 305 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 TTC30BQ8N4P2 665 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 ELMO2Q96JJ3 720 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 RAB33BQ9H082 229 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 UGT1A7Q9HAW7 530 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 UGT1A10Q9HAW8 530 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 UGT1A8Q9HAW9 530 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 IL26Q9NPH9 171 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 HACD3Q9P035 362 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 FAM8A1Q9UBU6 413 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 PLAAQ9Y263 795 aa18.77■□□□□ 0.6
CBWD3-204ENST00000377349 NOTCH2Q04721 2471 aa18.76■□□□□ 0.59
CBWD3-204ENST00000377349 GRID2IPA4D2P6 1211 aa18.76■□□□□ 0.59
CBWD3-204ENST00000377349 STX7O15400 261 aaKnown RBP18.76■□□□□ 0.59
CBWD3-204ENST00000377349 SPAG6O75602 509 aa18.76■□□□□ 0.59
CBWD3-204ENST00000377349 ANXA9O76027 345 aa18.76■□□□□ 0.59
CBWD3-204ENST00000377349 VCLP18206 1134 aa18.76■□□□□ 0.59
CBWD3-204ENST00000377349 NELFEP18615 380 aaKnown RBP18.76■□□□□ 0.59
CBWD3-204ENST00000377349 TMEM115Q12893 351 aaPredicted RBP18.76■□□□□ 0.59
CBWD3-204ENST00000377349 ERV3-1Q14264 604 aa18.76■□□□□ 0.59
CBWD3-204ENST00000377349 FAM92BQ6ZTR7 304 aa18.76■□□□□ 0.59
CBWD3-204ENST00000377349 GPR150Q8NGU9 434 aa18.76■□□□□ 0.59
CBWD3-204ENST00000377349 CCDC110Q8TBZ0 833 aa18.76■□□□□ 0.59
CBWD3-204ENST00000377349 ALG3Q92685 438 aa18.76■□□□□ 0.59
CBWD3-204ENST00000377349 MIB2Q96AX9 1013 aa18.76■□□□□ 0.59
CBWD3-204ENST00000377349 CALR3Q96L12 384 aaKnown RBP18.76■□□□□ 0.59
CBWD3-204ENST00000377349 AMFRQ9UKV5 643 aa18.76■□□□□ 0.59
CBWD3-204ENST00000377349 PCDHGA6Q9Y5G7 932 aa18.76■□□□□ 0.59
CBWD3-204ENST00000377349 ARL5AQ9Y689 179 aa18.76■□□□□ 0.59
CBWD3-204ENST00000377349 OR2AG2A6NM03 316 aa18.75■□□□□ 0.59
CBWD3-204ENST00000377349 RASSF9O75901 435 aa18.75■□□□□ 0.59
CBWD3-204ENST00000377349 TJP3O95049 919 aa18.75■□□□□ 0.59
CBWD3-204ENST00000377349 FTCDO95954 541 aa18.75■□□□□ 0.59
CBWD3-204ENST00000377349 EPOP01588 193 aa18.75■□□□□ 0.59
CBWD3-204ENST00000377349 PYGMP11217 842 aa18.75■□□□□ 0.59
CBWD3-204ENST00000377349 IDSP22304 550 aa18.75■□□□□ 0.59
CBWD3-204ENST00000377349 KLRB1Q12918 225 aa18.75■□□□□ 0.59
CBWD3-204ENST00000377349 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.75■□□□□ 0.59
CBWD3-204ENST00000377349 ANKRD20A2Q5SQ80 823 aa18.75■□□□□ 0.59
CBWD3-204ENST00000377349 ANKRD20A1Q5TYW2 823 aa18.75■□□□□ 0.59
CBWD3-204ENST00000377349 CACHD1Q5VU97 1274 aa18.75■□□□□ 0.59
CBWD3-204ENST00000377349 ANKRD20A3Q5VUR7 823 aa18.75■□□□□ 0.59
CBWD3-204ENST00000377349 DET1Q7L5Y6 550 aa18.75■□□□□ 0.59
CBWD3-204ENST00000377349 RASGRP3Q8IV61 690 aa18.75■□□□□ 0.59
CBWD3-204ENST00000377349 RBM12BQ8IXT5 1001 aaKnown RBP18.75■□□□□ 0.59
CBWD3-204ENST00000377349 CXorf40BQ96DE9 158 aa18.75■□□□□ 0.59
CBWD3-204ENST00000377349 STAMBPL1Q96FJ0 436 aa18.75■□□□□ 0.59
CBWD3-204ENST00000377349 SLC41A2Q96JW4 573 aa18.75■□□□□ 0.59
CBWD3-204ENST00000377349 ZCCHC2Q9C0B9 1178 aaKnown RBP18.75■□□□□ 0.59
CBWD3-204ENST00000377349 SNRNP200O75643 2136 aaKnown RBP18.75■□□□□ 0.59
CBWD3-204ENST00000377349 IGHV5-51A0A0C4DH38 117 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 CD97P48960 835 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 TMPRSS15P98073 1019 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 KIF5AQ12840 1032 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 SEPT6Q14141 434 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 SPARCL1Q14515 664 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 ZDHHC20Q5W0Z9 365 aa18.74■□□□□ 0.59
CBWD3-204ENST00000377349 TCTN3Q6NUS6 607 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 248.5 ms