RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 AGAP2Q99490 1192 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 RNF121Q9H920 327 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 FAM118AQ9NWS6 357 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 COMMD9Q9P000 198 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 NOD1Q9Y239 953 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.13□□□□□ -0.79
CD28-202ENST00000374481 METTL21EPA6NDL7 271 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 PRSS44E7EML9 344 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 ZBTB24O43167 697 aaPredicted RBP10.13□□□□□ -0.79
CD28-202ENST00000374481 GCATO75600 419 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 SCO1O75880 301 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 GLP2RO95838 553 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 DNASE1P24855 282 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 CLCN5P51795 746 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 CHRNEQ04844 493 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 SNTA1Q13424 505 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 TSTQ16762 297 aaKnown RBP10.13□□□□□ -0.79
CD28-202ENST00000374481 UAP1L1Q3KQV9 507 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 SETMARQ53H47 684 aaPredicted RBP10.13□□□□□ -0.79
CD28-202ENST00000374481 OVOS1Q6IE37 1185 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 CDC73Q6P1J9 531 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 DGLUCYQ7Z3D6 616 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 NRARPQ7Z6K4 114 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 LYSMD2Q8IV50 215 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 SCUBE3Q8IX30 993 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 COQ8AQ8NI60 647 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 SHKBP1Q8TBC3 707 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 ZNF416Q9BWM5 594 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 IFT22Q9H7X7 185 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 BTG4Q9NY30 223 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 NPAP1Q9NZP6 1156 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 NDUFAF4Q9P032 175 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 TSPAN16Q9UKR8 245 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 M0R2N6 131 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 DHX15O43143 795 aaKnown RBP10.13□□□□□ -0.79
CD28-202ENST00000374481 CYP19A1P11511 503 aaPredicted RBP10.13□□□□□ -0.79
CD28-202ENST00000374481 NUDT6P53370 316 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 GPR68Q15743 365 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 HKDC1Q2TB90 917 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 HSDL1Q3SXM5 330 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 NHSL2Q5HYW2 709 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 MPP7Q5T2T1 576 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 TFAP2DQ7Z6R9 452 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 DCP1BQ8IZD4 617 aaKnown RBP10.13□□□□□ -0.79
CD28-202ENST00000374481 ABI1Q8IZP0 508 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 PIAS4Q8N2W9 510 aaPredicted RBP10.13□□□□□ -0.79
CD28-202ENST00000374481 OR6C4Q8NGE1 309 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 STAG3L4Q8TBR4 150 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 TADA1Q96BN2 335 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 P2RY11Q96G91 374 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 WACQ9BTA9 647 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 CINPQ9BW66 212 aaPredicted RBP10.13□□□□□ -0.79
CD28-202ENST00000374481 JPH1Q9HDC5 661 aaPredicted RBP10.13□□□□□ -0.79
CD28-202ENST00000374481 MCUBQ9NWR8 336 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 MGAT4AQ9UM21 535 aa10.13□□□□□ -0.79
CD28-202ENST00000374481 ANKRD12Q6UB98 2062 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 CXCR6O00574 342 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 SLC30A4O14863 429 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 PIP5K1BO14986 540 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 DFNA5O60443 496 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 ALDOAP04075 364 aaKnown RBP10.12□□□□□ -0.79
CD28-202ENST00000374481 TP53P04637 393 aaPredicted RBP10.12□□□□□ -0.79
CD28-202ENST00000374481 HTR1BP28222 390 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 SOAT1P35610 550 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 ZMYND11Q15326 602 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 GRIK5Q16478 980 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 UGT8Q16880 541 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 ACOT1Q86TX2 421 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 LACC1Q8IV20 430 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 C9orf43Q8TAL5 461 aaPredicted RBP10.12□□□□□ -0.79
CD28-202ENST00000374481 TMEM168Q9H0V1 697 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 ERVMER34-1Q9H9K5 563 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 SCPEP1Q9HB40 452 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 TM9SF3Q9HD45 589 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 COL20A1Q9P218 1284 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 CNTN3Q9P232 1028 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 NARFQ9UHQ1 456 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 ZMYM5Q9UJ78 669 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 XRN1Q8IZH2 1706 aaKnown RBP10.12□□□□□ -0.79
CD28-202ENST00000374481 NRXN3Q9Y4C0 1643 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 BHMG1C9JSJ3 638 aaPredicted RBP10.12□□□□□ -0.79
CD28-202ENST00000374481 PVALBP20472 110 aaPredicted RBP10.12□□□□□ -0.79
CD28-202ENST00000374481 WEE1P30291 646 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 GALNT3Q14435 633 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 ZC3H3Q8IXZ2 948 aaKnown RBP10.12□□□□□ -0.79
CD28-202ENST00000374481 C4orf19Q8IY42 314 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 GDPD1Q8N9F7 314 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 SETD6Q8TBK2 473 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 TNIP3Q96KP6 325 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 MYRFLQ96LU7 910 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 RIPOR3Q96MK2 946 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 TMEM74Q96NL1 305 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 COL21A1Q96P44 957 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 POLR2J2Q9GZM3 115 aaKnown RBP10.12□□□□□ -0.79
CD28-202ENST00000374481 BCAS3Q9H6U6 928 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 SMURF1Q9HCE7 757 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 ACSL5Q9ULC5 683 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 CMAHPQ9Y471 501 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 TIMM22Q9Y584 194 aa10.12□□□□□ -0.79
CD28-202ENST00000374481 MYH11P35749 1972 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms