RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 BBOF1Q8ND07 529 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 UHMK1Q8TAS1 419 aaKnown RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 ASB12Q8WXK4 309 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 VOPP1Q96AW1 172 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 TADA1Q96BN2 335 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 IMP4Q96G21 291 aaKnown RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 ZNF599Q96NL3 588 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 FCRL5Q96RD9 977 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 NELL2Q99435 816 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 VAT1Q99536 393 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 WDR83Q9BRX9 315 aaKnown RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 SLC2A11Q9BYW1 496 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 BTBD1Q9H0C5 482 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 ECT2Q9H8V3 914 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 GTSE1Q9NYZ3 720 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 LHX3Q9UBR4 397 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 UBA2Q9UBT2 640 aaPredicted RBP3.57□□□□□ -1.84
MCF2-202ENST00000370573 RSPH14Q9UHP6 348 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 GGA2Q9UJY4 613 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 ATP23Q9Y6H3 246 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 NUMBLQ9Y6R0 609 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 X6R8D5 127 aa3.57□□□□□ -1.84
MCF2-202ENST00000370573 MYO10Q9HD67 2058 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 A0A1B0GTL3 188 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.56□□□□□ -1.84
MCF2-202ENST00000370573 ALOX15BO15296 676 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 USP12O75317 370 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 PPFIA2O75334 1257 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 ZNF189O75820 626 aaPredicted RBP3.56□□□□□ -1.84
MCF2-202ENST00000370573 TMCC1O94876 653 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 SUN1O94901 812 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 APOL3O95236 402 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 NFATC1O95644 943 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 MT-CYBP00156 380 aaPredicted RBP3.56□□□□□ -1.84
MCF2-202ENST00000370573 AGTP01019 485 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 APRTP07741 180 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 PSMC3P17980 439 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 CR2P20023 1033 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 ADRA1AP35348 466 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 ACTN2P35609 894 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 HSPA9P38646 679 aaKnown RBP3.56□□□□□ -1.84
MCF2-202ENST00000370573 OPRD1P41143 372 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 STK19P49842 368 aaPredicted RBP3.56□□□□□ -1.84
MCF2-202ENST00000370573 SLC12A1Q13621 1099 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 FASTKD3Q14CZ7 662 aaKnown RBP3.56□□□□□ -1.84
MCF2-202ENST00000370573 ATXN7L2Q5T6C5 722 aaPredicted RBP3.56□□□□□ -1.84
MCF2-202ENST00000370573 EMBQ6PCB8 327 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 HOOK3Q86VS8 718 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 CCDC25Q86WR0 208 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 DCAF4L2Q8NA75 395 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 ATG16L2Q8NAA4 619 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 MCUQ8NE86 351 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 SORCS1Q8WY21 1168 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.56□□□□□ -1.84
MCF2-202ENST00000370573 ATP2A3Q93084 1043 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 CAVIN3Q969G5 261 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 RAB24Q969Q5 203 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 EXOC4Q96A65 974 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 ZBTB9Q96C00 473 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 TMEM41AQ96HV5 264 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 RPL10LQ96L21 214 aaKnown RBP3.56□□□□□ -1.84
MCF2-202ENST00000370573 C20orf173Q96LM9 149 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 PSKH2Q96QS6 385 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 RBM15Q96T37 977 aaKnown RBP eCLIP3.56□□□□□ -1.84
MCF2-202ENST00000370573 FMO2Q99518 471 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 FERMT1Q9BQL6 677 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 TRMT61BQ9BVS5 477 aaKnown RBP3.56□□□□□ -1.84
MCF2-202ENST00000370573 TMEM120AQ9BXJ8 343 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 FAM129AQ9BZQ8 928 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 SLC25A51Q9H1U9 297 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 FBRSL1Q9HCM7 1045 aaKnown RBP3.56□□□□□ -1.84
MCF2-202ENST00000370573 SLC6A20Q9NP91 592 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 PARD6AQ9NPB6 346 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 PIH1D1Q9NWS0 290 aaKnown RBP3.56□□□□□ -1.84
MCF2-202ENST00000370573 SLCO3A1Q9UIG8 710 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 HPCAL4Q9UM19 191 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 SHOC2Q9UQ13 582 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 SLC27A6Q9Y2P4 619 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 TRIOO75962 3097 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 E7ESA3 106 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 INSIG1O15503 277 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 PMPCBO75439 489 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 ERLIN1O75477 346 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 CNOT4O95628 575 aaKnown RBP3.56□□□□□ -1.84
MCF2-202ENST00000370573 AP2A1O95782 977 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 POLBP06746 335 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 KITP10721 976 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 SRCP12931 536 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 MTHFD2P13995 350 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 TPH1P17752 444 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 HOXA5P20719 270 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 CNTFP26441 200 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 SDHAP31040 664 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 GJA4P35212 333 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 THBS2P35442 1172 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 CD86P42081 329 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 MAGEA3P43357 314 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 MAGEA4P43358 317 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 SLC16A1P53985 500 aa3.56□□□□□ -1.84
MCF2-202ENST00000370573 WNT3AP56704 352 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms