RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 KCTD15Q96SI1 283 aaPredicted RBP8.28□□□□□ -1.08
SKA2-201ENST00000330137 SLC30A2Q9BRI3 323 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 NUSAP1Q9BXS6 441 aaKnown RBP8.28□□□□□ -1.08
SKA2-201ENST00000330137 MRPL4Q9BYD3 311 aaKnown RBP8.28□□□□□ -1.08
SKA2-201ENST00000330137 C6orf62Q9GZU0 229 aaPredicted RBP8.28□□□□□ -1.08
SKA2-201ENST00000330137 PLCXD1Q9NUJ7 323 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 SETD4Q9NVD3 440 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 TBC1D24Q9ULP9 559 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 RNF6Q9Y252 685 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 KCNE2Q9Y6J6 123 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 SMCHD1A6NHR9 2005 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 KLRG2A4D1S0 409 aaPredicted RBP8.28□□□□□ -1.08
SKA2-201ENST00000330137 CD3EAPO15446 510 aaKnown RBP8.28□□□□□ -1.08
SKA2-201ENST00000330137 NDUFA2O43678 99 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 CDK14O94921 469 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 CST1P01037 141 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 PDGFAP04085 211 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 RETP07949 1114 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 HOXB8P17481 243 aaPredicted RBP8.28□□□□□ -1.08
SKA2-201ENST00000330137 TAL1P17542 331 aaPredicted RBP8.28□□□□□ -1.08
SKA2-201ENST00000330137 CD72P21854 359 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 GTF2E2P29084 291 aaKnown RBP8.28□□□□□ -1.08
SKA2-201ENST00000330137 NOS2P35228 1153 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 MASP1P48740 699 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 RGS7P49802 495 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 HERVK_113P63132 956 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 CCNA1P78396 465 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 NFIAQ12857 509 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 ASAH1Q13510 395 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 CAPRIN1Q14444 709 aaKnown RBP8.28□□□□□ -1.08
SKA2-201ENST00000330137 PCSK7Q16549 785 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 ACVR1CQ8NER5 493 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 APPL2Q8NEU8 664 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 CLEC4DQ8WXI8 215 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 KHSRPQ92945 711 aaKnown RBP eCLIP8.28□□□□□ -1.089e-7■■■■□ 21.9
SKA2-201ENST00000330137 MOCOSQ96EN8 888 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 ERVK-6Q9BXR3 956 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 ELOVL4Q9GZR5 314 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 SLC22A4Q9H015 551 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 DYRK4Q9NR20 520 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 RYDENQ9NUL5 291 aaKnown RBP8.28□□□□□ -1.08
SKA2-201ENST00000330137 GLTPQ9NZD2 209 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 PGAP2Q9UHJ9 254 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 POLHQ9Y253 713 aa8.28□□□□□ -1.08
SKA2-201ENST00000330137 DICER1Q9UPY3 1922 aaKnown RBP8.28□□□□□ -1.08
SKA2-201ENST00000330137 A0A0X1KG70 313 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 DDTLA6NHG4 134 aaPredicted RBP8.27□□□□□ -1.08
SKA2-201ENST00000330137 DSCR3O14972 297 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 AXIN1O15169 862 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 HUS1O60921 280 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 PDE9AO76083 593 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 SCELO95171 688 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 GH2P01242 217 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 MT-ND2P03891 347 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 CLCN5P51795 746 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 IL5RAQ01344 420 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 ELP6Q0PNE2 266 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 TRIP4Q15650 581 aaPredicted RBP8.27□□□□□ -1.08
SKA2-201ENST00000330137 BCL7AQ4VC05 210 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 Q5BKY6 102 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 BSPRYQ5W0U4 402 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 PKN3Q6P5Z2 889 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 SHQ1Q6PI26 577 aaKnown RBP8.27□□□□□ -1.08
SKA2-201ENST00000330137 DPY19L3Q6ZPD9 716 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 SLC46A3Q7Z3Q1 461 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 NLGN4XQ8N0W4 816 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 CHCHD4Q8N4Q1 142 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 ZMIZ2Q8NF64 920 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 IL31RAQ8NI17 732 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 LRRC20Q8TCA0 184 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 CITED4Q96RK1 184 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 LGMNQ99538 433 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 RAD9AQ99638 391 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 SDHCQ99643 169 aaPredicted RBP8.27□□□□□ -1.08
SKA2-201ENST00000330137 IL1RL2Q9HB29 575 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 ZNF277Q9NRM2 450 aaPredicted RBP8.27□□□□□ -1.08
SKA2-201ENST00000330137 AIG1Q9NVV5 245 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 COL20A1Q9P218 1284 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 FAM198AQ9UFP1 575 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 HCN4Q9Y3Q4 1203 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 RIPK3Q9Y572 518 aa8.27□□□□□ -1.08
SKA2-201ENST00000330137 FAM25EA8MYX2 175 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 E9PQ18 207 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 NFKBIEO00221 500 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 AZIN1O14977 448 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 CACNG3O60359 315 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 SEC22BO75396 215 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 HOXD8P13378 290 aaPredicted RBP8.27□□□□□ -1.09
SKA2-201ENST00000330137 NCF1P14598 390 aaPredicted RBP8.27□□□□□ -1.09
SKA2-201ENST00000330137 MSH3P20585 1137 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 CPN2P22792 545 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 CRKP46108 304 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 RPL34P49207 117 aaKnown RBP8.27□□□□□ -1.09
SKA2-201ENST00000330137 LSM3P62310 102 aaKnown RBP8.27□□□□□ -1.09
SKA2-201ENST00000330137 PIGFQ07326 219 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 PKDCCQ504Y2 493 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 TOR2AQ5JU69 321 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 CEP97Q8IW35 865 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 VWA5B2Q8N398 1253 aa8.27□□□□□ -1.09
SKA2-201ENST00000330137 CERS5Q8N5B7 392 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms