RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 CALML6Q8TD86 181 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 ELMO1Q92556 727 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 PANX3Q96QZ0 392 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 TRIM51Q9BSJ1 452 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 CCDC86Q9H6F5 360 aaKnown RBP19.44■□□□□ 0.7
VEGFB-201ENST00000309422 RABGEF1Q9UJ41 708 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 CDC23Q9UJX2 597 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 COLEC10Q9Y6Z7 277 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 LILRA5A6NI73 299 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 NTN3O00634 580 aaPredicted RBP19.44■□□□□ 0.7
VEGFB-201ENST00000309422 PRMT5O14744 637 aaPredicted RBP19.44■□□□□ 0.7
VEGFB-201ENST00000309422 LIN7AO14910 233 aaPredicted RBP19.44■□□□□ 0.7
VEGFB-201ENST00000309422 EML2O95834 649 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 PRSS56P0CW18 603 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 AMD1P17707 334 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 PGAM1P18669 254 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 NDUFS1P28331 727 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 CA5AP35218 305 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 ARL4CP56559 192 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 C2orf54Q08AI8 447 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 RPA4Q13156 261 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 TUBB2AQ13885 445 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 HIF1AQ16665 826 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 METRNLQ641Q3 311 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 LSMEM2Q8N112 164 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 CLDN19Q8N6F1 224 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 TMEM159Q96B96 161 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 C12orf66Q96MD2 445 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 TUBB2BQ9BVA1 445 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 NRSN2Q9GZP1 204 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 CCDC68Q9H2F9 335 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 COG4Q9H9E3 785 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 UCK1Q9HA47 277 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 PSMD13Q9UNM6 376 aa19.44■□□□□ 0.7
VEGFB-201ENST00000309422 OR52A4PA6NMU1 304 aa19.43■□□□□ 0.7
VEGFB-201ENST00000309422 H3BMM5 538 aa19.43■□□□□ 0.7
VEGFB-201ENST00000309422 FANCGO15287 622 aa19.43■□□□□ 0.7
VEGFB-201ENST00000309422 PPM1DO15297 605 aa19.43■□□□□ 0.7
VEGFB-201ENST00000309422 KDM1AO60341 852 aa19.43■□□□□ 0.7
VEGFB-201ENST00000309422 USP1O94782 785 aa19.43■□□□□ 0.7
VEGFB-201ENST00000309422 OGNP20774 298 aaKnown RBP19.43■□□□□ 0.7
VEGFB-201ENST00000309422 BOP1Q14137 746 aaKnown RBP19.43■□□□□ 0.7
VEGFB-201ENST00000309422 BBS9Q3SYG4 887 aa19.43■□□□□ 0.7
VEGFB-201ENST00000309422 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.43■□□□□ 0.7
VEGFB-201ENST00000309422 CES3Q6UWW8 571 aa19.43■□□□□ 0.7
VEGFB-201ENST00000309422 ZNF761Q86XN6 746 aaPredicted RBP19.43■□□□□ 0.7
VEGFB-201ENST00000309422 LMNTD2Q8IXW0 634 aa19.43■□□□□ 0.7
VEGFB-201ENST00000309422 KIF18AQ8NI77 898 aa19.43■□□□□ 0.7
VEGFB-201ENST00000309422 TCF12Q99081 682 aa19.43■□□□□ 0.7
VEGFB-201ENST00000309422 CMKLR1Q99788 373 aa19.43■□□□□ 0.7
VEGFB-201ENST00000309422 WWP1Q9H0M0 922 aa19.43■□□□□ 0.7
VEGFB-201ENST00000309422 IGHV1OR21-1A0A087WYE8 117 aa19.42■□□□□ 0.7
VEGFB-201ENST00000309422 CCDC187A0A096LP49 1063 aa19.42■□□□□ 0.7
VEGFB-201ENST00000309422 A0A1W2PQM1 296 aa19.42■□□□□ 0.7
VEGFB-201ENST00000309422 SEC31AO94979 1220 aaKnown RBP19.42■□□□□ 0.7
VEGFB-201ENST00000309422 MTHFD1P11586 935 aaKnown RBP19.42■□□□□ 0.7
VEGFB-201ENST00000309422 RBMS1P29558 406 aaKnown RBP19.42■□□□□ 0.7
VEGFB-201ENST00000309422 ITGA8P53708 1063 aa19.42■□□□□ 0.7
VEGFB-201ENST00000309422 UBE2IP63279 158 aaKnown RBP19.42■□□□□ 0.7
VEGFB-201ENST00000309422 LONRF1Q17RB8 773 aa19.42■□□□□ 0.7
VEGFB-201ENST00000309422 ANKRD20A4Q4UJ75 823 aa19.42■□□□□ 0.7
VEGFB-201ENST00000309422 TMEM26Q6ZUK4 368 aa19.42■□□□□ 0.7
VEGFB-201ENST00000309422 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.42■□□□□ 0.72e-7■■■■■ 75.9
VEGFB-201ENST00000309422 WDR36Q8NI36 951 aaKnown RBP19.42■□□□□ 0.7
VEGFB-201ENST00000309422 ZCCHC14Q8WYQ9 949 aaKnown RBP19.42■□□□□ 0.7
VEGFB-201ENST00000309422 GATA6Q92908 595 aa19.42■□□□□ 0.7
VEGFB-201ENST00000309422 FAM167BQ9BTA0 163 aa19.42■□□□□ 0.7
VEGFB-201ENST00000309422 C20orf96Q9NUD7 363 aaPredicted RBP19.42■□□□□ 0.7
VEGFB-201ENST00000309422 ATXN7L1Q9ULK2 861 aaPredicted RBP19.42■□□□□ 0.7
VEGFB-201ENST00000309422 PCDHB1Q9Y5F3 818 aa19.42■□□□□ 0.7
VEGFB-201ENST00000309422 TRABD2BA6NFA1 517 aa19.41■□□□□ 0.7
VEGFB-201ENST00000309422 KPNA5O15131 536 aa19.41■□□□□ 0.7
VEGFB-201ENST00000309422 APOA4P06727 396 aa19.41■□□□□ 0.7
VEGFB-201ENST00000309422 JMJD7P0C870 316 aa19.41■□□□□ 0.7
VEGFB-201ENST00000309422 CCKBRP32239 447 aa19.41■□□□□ 0.7
VEGFB-201ENST00000309422 EIF3BP55884 814 aaKnown RBP19.41■□□□□ 0.7
VEGFB-201ENST00000309422 GABREP78334 506 aa19.41■□□□□ 0.7
VEGFB-201ENST00000309422 RPE65Q16518 533 aa19.41■□□□□ 0.7
VEGFB-201ENST00000309422 C3orf38Q5JPI3 329 aa19.41■□□□□ 0.7
VEGFB-201ENST00000309422 ZNF470Q6ECI4 717 aa19.41■□□□□ 0.7
VEGFB-201ENST00000309422 NEPROQ6NW34 567 aa19.41■□□□□ 0.7
VEGFB-201ENST00000309422 ARMC6Q6NXE6 501 aa19.41■□□□□ 0.7
VEGFB-201ENST00000309422 C8orf74Q6P047 294 aa19.41■□□□□ 0.7
VEGFB-201ENST00000309422 FOXR1Q6PIV2 292 aa19.41■□□□□ 0.7
VEGFB-201ENST00000309422 FAM83HQ6ZRV2 1179 aaPredicted RBP19.41■□□□□ 0.7
VEGFB-201ENST00000309422 PLXDC1Q8IUK5 500 aa19.41■□□□□ 0.7
VEGFB-201ENST00000309422 NAT14Q8WUY8 206 aa19.41■□□□□ 0.7
VEGFB-201ENST00000309422 LRRC39Q96DD0 335 aa19.41■□□□□ 0.7
VEGFB-201ENST00000309422 LIN37Q96GY3 246 aaPredicted RBP19.41■□□□□ 0.7
VEGFB-201ENST00000309422 FOXP3Q9BZS1 431 aa19.41■□□□□ 0.7
VEGFB-201ENST00000309422 RDH14Q9HBH5 336 aa19.41■□□□□ 0.7
VEGFB-201ENST00000309422 E5RI56 91 aa19.4■□□□□ 0.7
VEGFB-201ENST00000309422 UBXN7O94888 489 aa19.4■□□□□ 0.7
VEGFB-201ENST00000309422 RPN2P04844 631 aa19.4■□□□□ 0.7
VEGFB-201ENST00000309422 SLC19A1P41440 591 aa19.4■□□□□ 0.7
VEGFB-201ENST00000309422 MAGEA3P43357 314 aa19.4■□□□□ 0.7
VEGFB-201ENST00000309422 DHX9Q08211 1270 aaKnown RBP19.4■□□□□ 0.7
VEGFB-201ENST00000309422 TRA2AQ13595 282 aaKnown RBP eCLIP19.4■□□□□ 0.7
VEGFB-201ENST00000309422 CLCA4Q14CN2 919 aa19.4■□□□□ 0.7
VEGFB-201ENST00000309422 SPANXN3Q5MJ09 141 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms