RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 WNT3AP56704 352 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 TRIP4Q15650 581 aaPredicted RBP10.74□□□□□ -0.69
ZNF558-201ENST00000301475 RSBN1Q5VWQ0 802 aaPredicted RBP10.74□□□□□ -0.69
ZNF558-201ENST00000301475 SLX4IPQ5VYV7 408 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 DCAF15Q66K64 600 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 ZFAND4Q86XD8 727 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 KIAA1958Q8N8K9 716 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 OR6P1Q8NGX9 317 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 KCTD13Q8WZ19 329 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 ZNF583Q96ND8 569 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 GAD1Q99259 594 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 NXF3Q9H4D5 531 aaKnown RBP10.74□□□□□ -0.69
ZNF558-201ENST00000301475 WDCPQ9H6R7 721 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 ZBTB20Q9HC78 741 aaPredicted RBP10.74□□□□□ -0.69
ZNF558-201ENST00000301475 C3orf18Q9UK00 162 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 IKZF3Q9UKT9 509 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 CAB39Q9Y376 341 aaPredicted RBP10.74□□□□□ -0.69
ZNF558-201ENST00000301475 PCDHB14Q9Y5E9 798 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 COL1A2P08123 1366 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 FAM234BA2RU67 622 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 M0QX08 132 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 PIRO00625 290 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 RAD51BO15315 384 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 IDH3BO43837 385 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 ZNF37AP17032 561 aaPredicted RBP10.74□□□□□ -0.69
ZNF558-201ENST00000301475 PFKLP17858 780 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 FDXRP22570 491 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 CCNCP24863 283 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 RYKP34925 604 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 SLC26A3P40879 764 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 SMN1Q16637 294 aaKnown RBP10.74□□□□□ -0.69
ZNF558-201ENST00000301475 PM20D1Q6GTS8 502 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 CES5AQ6NT32 575 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 SAPCD2Q86UD0 394 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 HEATR4Q86WZ0 1026 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 PLD3Q8IV08 490 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 DPP10Q8N608 796 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 DCBLD1Q8N8Z6 715 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 APPL2Q8NEU8 664 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 SLC47A1Q96FL8 570 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 DUSP21Q9H596 190 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 ACTR8Q9H981 624 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 DERAQ9Y315 318 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 PABPN1LA6NDY0 278 aaKnown RBP10.74□□□□□ -0.69
ZNF558-201ENST00000301475 AGAP5A6NIR3 686 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 VPS4BO75351 444 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 CRCPO75575 148 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 CHRNB1P11230 501 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 CYP4B1P13584 511 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 AKAP5P24588 427 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 HOXA11P31270 313 aaPredicted RBP10.74□□□□□ -0.69
ZNF558-201ENST00000301475 SLC26A2P50443 739 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 CLCNKBP51801 687 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 DGKQP52824 942 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 FCGRTP55899 365 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 SOX4Q06945 474 aaPredicted RBP10.74□□□□□ -0.69
ZNF558-201ENST00000301475 GRIK2Q13002 908 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 E2F2Q14209 437 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 ZNF181Q2M3W8 571 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 GJC2Q5T442 439 aaPredicted RBP10.74□□□□□ -0.69
ZNF558-201ENST00000301475 C9orf131Q5VYM1 1079 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 NECAB2Q7Z6G3 386 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 RAB44Q7Z6P3 723 aaPredicted RBP10.74□□□□□ -0.69
ZNF558-201ENST00000301475 GALNT5Q7Z7M9 940 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 SYVN1Q86TM6 617 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 DCP2Q8IU60 420 aaKnown RBP10.74□□□□□ -0.69
ZNF558-201ENST00000301475 NLGN4XQ8N0W4 816 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 SVOPLQ8N434 492 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 RHBDF1Q96CC6 855 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 ZHX1-C8orf76Q96EF9 292 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 PGAP3Q96FM1 320 aaPredicted RBP10.74□□□□□ -0.69
ZNF558-201ENST00000301475 TNIP3Q96KP6 325 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 TMEM209Q96SK2 561 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 DCSTAMPQ9H295 470 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 ACTL8Q9H568 366 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 IKZF5Q9H5V7 419 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 RBM22Q9NW64 420 aaKnown RBP eCLIP10.74□□□□□ -0.69
ZNF558-201ENST00000301475 LIMD1Q9UGP4 676 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 KCTD3Q9Y597 815 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 N6AMT1Q9Y5N5 214 aa10.74□□□□□ -0.69
ZNF558-201ENST00000301475 GNGT2O14610 69 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 SLC16A6O15403 523 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 SCO2O43819 266 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 CCNKO75909 580 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 RECQL4O94761 1208 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 PRKD3O94806 890 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 PTTG1O95997 202 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 LCKP06239 509 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 HOXD8P13378 290 aaPredicted RBP10.73□□□□□ -0.69
ZNF558-201ENST00000301475 IGFBP6P24592 240 aaPredicted RBP10.73□□□□□ -0.69
ZNF558-201ENST00000301475 TRPC1P48995 793 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 ST13P50502 369 aaKnown RBP10.73□□□□□ -0.69
ZNF558-201ENST00000301475 RACK1P63244 317 aaKnown RBP10.73□□□□□ -0.69
ZNF558-201ENST00000301475 IHHQ14623 411 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 KDELC1Q6UW63 502 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 CCBE1Q6UXH8 406 aaPredicted RBP10.73□□□□□ -0.69
ZNF558-201ENST00000301475 BHLHA9Q7RTU4 235 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 APOBEC3FQ8IUX4 373 aaKnown RBP10.73□□□□□ -0.69
ZNF558-201ENST00000301475 CHPFQ8IZ52 775 aa10.73□□□□□ -0.69
ZNF558-201ENST00000301475 TSPAN18Q96SJ8 248 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms