RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 PACS1Q6VY07 963 aa16.16■□□□□ 0.18
LIM2-201ENST00000221973 KIAA0408Q6ZU52 694 aa16.16■□□□□ 0.18
LIM2-201ENST00000221973 STRA8Q7Z7C7 330 aa16.16■□□□□ 0.18
LIM2-201ENST00000221973 PARGQ86W56 976 aa16.16■□□□□ 0.18
LIM2-201ENST00000221973 SLC26A11Q86WA9 606 aa16.16■□□□□ 0.18
LIM2-201ENST00000221973 TRAPPC5Q8IUR0 188 aa16.16■□□□□ 0.18
LIM2-201ENST00000221973 HID1Q8IV36 788 aa16.16■□□□□ 0.18
LIM2-201ENST00000221973 GALNT15Q8N3T1 639 aa16.16■□□□□ 0.18
LIM2-201ENST00000221973 SCG3Q8WXD2 468 aaKnown RBP16.16■□□□□ 0.18
LIM2-201ENST00000221973 LPGAT1Q92604 370 aa16.16■□□□□ 0.18
LIM2-201ENST00000221973 CLPBQ9H078 707 aa16.16■□□□□ 0.18
LIM2-201ENST00000221973 CAAP1Q9H8G2 361 aa16.16■□□□□ 0.18
LIM2-201ENST00000221973 CARS2Q9HA77 564 aaKnown RBP16.16■□□□□ 0.18
LIM2-201ENST00000221973 NSMCE4AQ9NXX6 385 aa16.16■□□□□ 0.18
LIM2-201ENST00000221973 TXNDC16Q9P2K2 825 aa16.16■□□□□ 0.18
LIM2-201ENST00000221973 FTSJ1Q9UET6 329 aa16.16■□□□□ 0.18
LIM2-201ENST00000221973 ZNHIT2Q9UHR6 403 aa16.16■□□□□ 0.18
LIM2-201ENST00000221973 SUFUQ9UMX1 484 aa16.16■□□□□ 0.18
LIM2-201ENST00000221973 VPS9D1Q9Y2B5 631 aa16.16■□□□□ 0.18
LIM2-201ENST00000221973 RAXQ9Y2V3 346 aa16.16■□□□□ 0.18
LIM2-201ENST00000221973 PCYT1BQ9Y5K3 369 aaPredicted RBP16.16■□□□□ 0.18
LIM2-201ENST00000221973 FASNP49327 2511 aaKnown RBP16.16■□□□□ 0.18
LIM2-201ENST00000221973 URB1O60287 2271 aaKnown RBP16.16■□□□□ 0.18
LIM2-201ENST00000221973 UQCRHLA0A096LP55 91 aa16.15■□□□□ 0.18
LIM2-201ENST00000221973 POC1B-GALNT4F8VUJ3 575 aa16.15■□□□□ 0.18
LIM2-201ENST00000221973 PRMT5O14744 637 aaPredicted RBP16.15■□□□□ 0.18
LIM2-201ENST00000221973 TNFRSF10CO14798 259 aa16.15■□□□□ 0.18
LIM2-201ENST00000221973 DNAJC6O75061 913 aa16.15■□□□□ 0.18
LIM2-201ENST00000221973 IVLP07476 585 aa16.15■□□□□ 0.18
LIM2-201ENST00000221973 UQCRHP07919 91 aa16.15■□□□□ 0.18
LIM2-201ENST00000221973 EPHA8P29322 1005 aaPredicted RBP16.15■□□□□ 0.18
LIM2-201ENST00000221973 RXRGP48443 463 aa16.15■□□□□ 0.18
LIM2-201ENST00000221973 CD151P48509 253 aa16.15■□□□□ 0.18
LIM2-201ENST00000221973 CLDN6P56747 220 aa16.15■□□□□ 0.18
LIM2-201ENST00000221973 PPARDQ03181 441 aa16.15■□□□□ 0.18
LIM2-201ENST00000221973 BNIP3Q12983 259 aa16.15■□□□□ 0.18
LIM2-201ENST00000221973 BEND7Q8N7W2 519 aaPredicted RBP16.15■□□□□ 0.18
LIM2-201ENST00000221973 ATXN7L3BQ96GX2 97 aa16.15■□□□□ 0.18
LIM2-201ENST00000221973 P2RY12Q9H244 342 aa16.15■□□□□ 0.18
LIM2-201ENST00000221973 DNAJC28Q9NX36 388 aa16.15■□□□□ 0.18
LIM2-201ENST00000221973 KLF15Q9UIH9 416 aa16.15■□□□□ 0.18
LIM2-201ENST00000221973 EXOC1LA0A1B0GW35 172 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 GPR89AB7ZAQ6 455 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 CHUKO15111 745 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 GRID2O43424 1007 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 SGTAO43765 313 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 FAM155BO75949 473 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 AP2A2O94973 939 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 RASGRP1O95267 797 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 TNFP01375 233 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 SHBGP04278 402 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 GPR89BP0CG08 455 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 GP5P40197 560 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 CYP4F3Q08477 520 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 DNAJC3Q13217 504 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 NAB1Q13506 487 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 TCEA2Q15560 299 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 COL28A1Q2UY09 1125 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 KLHL38Q2WGJ6 581 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 PLA2G4EQ3MJ16 856 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 PYCR3Q53H96 274 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 CCDC157Q569K6 752 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 CTSL3PQ5NE16 218 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 PTRHD1Q6GMV3 140 aaKnown RBP16.14■□□□□ 0.17
LIM2-201ENST00000221973 LRRC6Q86X45 466 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 GALNT13Q8IUC8 556 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 PHACTR4Q8IZ21 702 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 MREGQ8N565 214 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 SCARF2Q96GP6 870 aaPredicted RBP16.14■□□□□ 0.17
LIM2-201ENST00000221973 CPNE1Q99829 537 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 TCEAL2Q9H3H9 227 aaPredicted RBP16.14■□□□□ 0.17
LIM2-201ENST00000221973 RMI1Q9H9A7 625 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 ERVMER34-1Q9H9K5 563 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 PCDHGA1Q9Y5H4 931 aa16.14■□□□□ 0.17
LIM2-201ENST00000221973 IQCF5A8MTL0 148 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 ESR1P03372 595 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 OR56A5P0C7T3 313 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 PKMP14618 531 aaKnown RBP16.13■□□□□ 0.17
LIM2-201ENST00000221973 JUNDP17535 347 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 ITGB6P18564 788 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 RPS3P23396 243 aaKnown RBP eCLIP16.13■□□□□ 0.17
LIM2-201ENST00000221973 PBLDP30039 288 aaPredicted RBP16.13■□□□□ 0.17
LIM2-201ENST00000221973 ACADVLP49748 655 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 HK3P52790 923 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 COL9A2Q14055 689 aaPredicted RBP16.13■□□□□ 0.17
LIM2-201ENST00000221973 INAVAQ3KP66 663 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 BCL7AQ4VC05 210 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 BEND6Q5SZJ8 279 aaPredicted RBP16.13■□□□□ 0.17
LIM2-201ENST00000221973 ZNF549Q6P9A3 640 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 GALNT7Q86SF2 657 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 LRRTM4Q86VH4 590 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 ZC3HC1Q86WB0 502 aaKnown RBP16.13■□□□□ 0.17
LIM2-201ENST00000221973 ZNF547Q8IVP9 402 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 EID2Q8N6I1 236 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 HNRNPLLQ8WVV9 542 aaKnown RBP16.13■□□□□ 0.17
LIM2-201ENST00000221973 CNDP2Q96KP4 475 aaKnown RBP16.13■□□□□ 0.17
LIM2-201ENST00000221973 BIRC8Q96P09 236 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 OR2M4Q96R27 311 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 NDNQ99608 321 aa16.13■□□□□ 0.17
LIM2-201ENST00000221973 CCDC77Q9BR77 488 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms