RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Apobec3Q99J72 440 aaKnown RBP12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Olfr172E9Q8F6 309 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Usp17ldG5E8G2 545 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Usp17lcG5E8I7 545 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 AoahO35298 574 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Cdc6O89033 562 aaKnown RBP12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Tbx4P70325 552 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Syndig1lQ3USQ7 237 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Tmem45aQ60774 273 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Sh3d19Q91X43 789 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Pdia5Q921X9 517 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Zfp809G3X9G7 402 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Vmn2r2L7N2E9 908 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Cyp2b9P12790 491 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Htr4P97288 388 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 StimateQ3UF25 288 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Abl2Q4JIM5 1182 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Znf423Q80TS5 1292 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Samd3Q8C4H2 520 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Mamdc2Q8CG85 686 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Pcdhga6Q91XY2 932 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Mfsd14aP70187 490 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 UqcrhP99028 89 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Clca4bQ3UW98 925 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Zzz3Q6KAQ7 910 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Ube2r2Q6ZWZ2 238 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Rbm34Q8C5L7 375 aaKnown RBP12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Fam122aQ9DB52 284 aa12.3□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Tceal7A3KGA4 98 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Mid1O70583 680 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 RxrbP28704 520 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Prpf38bQ80SY5 542 aaKnown RBP12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Q8CD60 292 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Dennd1cQ8CFK6 786 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 PpatQ8CIH9 517 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Lrch4Q921G6 680 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 SncaipQ99ME3 962 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 PacrglQ9D3X5 248 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Rab25Q9WTL2 213 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Ap2a1P17426 977 aaKnown RBP12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 St14P56677 855 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Ap1s1P61967 158 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Olfr681Q3SXH8 315 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Tnks2Q3UES3 1166 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Olfr679Q8VGV0 315 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Tbc1d21Q9D9D3 336 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Clk4O35493 481 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 LatO54957 242 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Mup4P11590 178 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 ErfP70459 551 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Ano7Q14AT5 859 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Prkg2Q61410 762 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Olfr1062Q7TR71 315 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Lrrc42Q8R2U7 421 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 ClpxQ9JHS4 634 aaKnown RBP12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Fam209A2APA5 170 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Cd247P24161 164 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Mc4rP56450 332 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 MarcoQ60754 518 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Ggt1Q60928 568 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Grid2Q61625 1007 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Tmem220Q8BP07 167 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Polr1eQ8K202 482 aaKnown RBP12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Acap1Q8K2H4 740 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Sirt2Q8VDQ8 389 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Fbxo40P62932 710 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Agxt2Q3UEG6 513 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Vwa7Q9JHA8 891 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Zfp990B1AVN5 605 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Cops4O88544 406 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Rap1gap2Q5SVL6 712 aaKnown RBP12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Hsd3b5Q61694 373 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 AuhQ9JLZ3 314 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Dock11A2AF47 2073 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Slc6a6O35316 621 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Kcnj12P52187 427 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 UtyP79457 1212 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Msx2Q03358 267 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 March4Q80TE3 409 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Celf3Q8CIN6 465 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Prkd3Q8K1Y2 889 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Zfp940Q8R2Q3 566 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Slc15a4Q91W98 574 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Lrrc57Q9D1G5 239 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Fam90a1bQ9D4F3 419 aa12.29□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Vmn2r125D3Z3M1 369 aa12.28□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Gm4302E9PX25 294 aa12.28□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Barx2O08686 283 aa12.28□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Neurod4O09105 330 aa12.28□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Ninj1O70131 152 aa12.28□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Rpl7aP12970 266 aaKnown RBP12.28□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Vcam1P29533 739 aa12.28□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Nr5a2P45448 560 aa12.28□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 MyrflQ3UN70 904 aa12.28□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Zswim5Q80TC6 1188 aa12.28□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Pp2d1Q8BVT6 620 aa12.28□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Gpr158Q8C419 1200 aa12.28□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Rell1Q8K2J7 272 aa12.28□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Olfr826Q8VFU6 313 aa12.28□□□□□ -0.44
Vcpip1-201ENSMUST00000057438 Olfr825Q8VFU7 320 aa12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 43.4 ms