RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Sema3aO08665 772 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 St14P56677 855 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Cd300lgQ1ERP8 331 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 StimateQ3UF25 288 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Orai3Q6P8G8 290 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Tas2r38Q7TQA6 331 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Kdm1bQ8CIG3 826 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Camk1Q91YS8 374 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 LipaQ9Z0M5 397 aa16.43■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Klrb1aP27811 227 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Wdr75Q3U821 830 aaKnown RBP16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 StyxQ60969 223 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Kiaa0895Q7TQE7 519 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Galnt7Q80VA0 657 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Olfr586Q8VH13 317 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Kat8Q9D1P2 458 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Hspb11Q9D6H2 143 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ap1s1P61967 158 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Lrrn1Q61809 716 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Nadk2Q8C5H8 452 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Q8CDN1 933 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Aqp12Q8CHJ2 290 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Snx20Q9D2Y5 313 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Neurod4O09105 330 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Gli1P47806 1111 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Psme2P97372 239 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Galnt10Q6P9S7 603 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Unc93b1Q8VCW4 598 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 PompQ9CQT5 141 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Dnase1l1Q9D7J6 314 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Hsd17b11Q9EQ06 298 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Epb41l4bQ9JMC8 527 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ddx6P54823 483 aaKnown RBP16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Q8CCC3 530 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Hpf1Q8CFE2 346 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Cyp51a1Q8K0C4 503 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Zbtb32Q9JKD9 465 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Tlx3O55144 291 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ppp3caP63328 521 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Kat7Q5SVQ0 613 aaKnown RBP16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 MaelQ8BVN9 434 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Trim3Q9R1R2 744 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Fam151bD3YUE4 279 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 SqleP52019 572 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 MarcoQ60754 518 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Calm5Q6W3E0 140 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Q8BHG2 160 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Tmem80Q9D3H0 123 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 SgshQ9EQ08 502 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Igdcc4Q9EQS9 1252 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 DgkeQ9R1C6 564 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 AtrnQ9WU60 1428 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Psmd4O35226 376 aaKnown RBP16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 KeraO35367 351 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Dennd1bQ3U1T9 766 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ggt1Q60928 568 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Smu1Q3UKJ7 513 aaKnown RBP16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Psd2Q6P1I6 770 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Rdh12Q8BYK4 316 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ccser1Q8C0C4 895 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ampd2Q9DBT5 798 aa16.42■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Topbp1Q6ZQF0 1515 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Gtpbp1O08582 668 aaKnown RBP16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Fabp3P11404 133 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ube2r2Q6ZWZ2 238 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ces2eQ8BK48 559 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Tmem159Q922Z1 161 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Slc34a2Q9DBP0 697 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Col16a1Q8BLX7 1580 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Cdh8P97291 799 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Snx6Q6P8X1 406 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Npr2Q6VVW5 1047 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Pcdhga6Q91XY2 932 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Asf1aQ9CQE6 204 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Dppa5aQ9CQS7 118 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Hnf4aP49698 474 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 CtscP97821 462 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Pcdhga11Q91XY8 933 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 CrebzfQ91ZR3 358 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ccdc3Q9D6Y1 273 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Lrrc34Q9DAM1 415 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 ClpxQ9JHS4 634 aaKnown RBP16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Adam25Q9R159 760 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Zfp938E9Q9G3 579 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Psmc3ipO35047 217 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Znf512Q69Z99 562 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Bnip1Q6QD59 228 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Acad10Q8K370 1069 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Fabp12Q9DAK4 132 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 CpqQ9WVJ3 470 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Eri2Q5BKS4 688 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 P4ha3Q6W3F0 542 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Sephs1Q8BH69 392 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Olfml2aQ8BHP7 681 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Fam90a1bQ9D4F3 419 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 LatO54957 242 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ptpn1P35821 432 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Serpina7P61939 418 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 H2-Q2Q4KN81 360 aa16.41■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Znf513Q6PD29 541 aa16.41■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms