RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Slc22a7Q91WU2 540 aa18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Slc44a3Q921V7 656 aa18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 PrkxQ922R0 355 aa18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Tchhl1Q9D3P1 638 aa18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Exoc2Q9D4H1 924 aa18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Cnbd2Q9D5U8 673 aa18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Ccdc97Q9DBT3 340 aa18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 VapaQ9WV55 249 aaKnown RBP18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Krt6bQ9Z331 562 aa18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Alkal1J3QPP8 127 aa18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Ccdc61Q3UJV1 511 aa18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 VwdeQ6DFV8 926 aa18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Shkbp1Q6P7W2 704 aa18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Taf1cQ6PDZ2 836 aa18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Mgat5bQ765H6 792 aa18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Teddm1aQ810U2 305 aa18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Kyat1Q8BTY1 424 aa18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Q8BWQ6 963 aa18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Diras1Q91Z61 198 aa18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Cryl1Q99KP3 319 aa18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Yae1d1Q9DAY6 216 aa18.15■□□□□ 0.5
Ccdc3-201ENSMUST00000027988 Vmn2r73D3Z7M3 851 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Vmn2r38G3UYA8 861 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Vmn2r33K7N705 861 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Btnl2O70355 454 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Esr1P19785 599 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Spata48Q5NC83 441 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Inppl1Q6P549 1257 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Dna2Q6ZQJ5 1062 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Lrp10Q7TQH7 713 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Tmem169Q8BG50 297 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Strip2Q8C9H6 844 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Dcaf12l1Q8CBW4 501 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Erich5Q8K0S2 362 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Kctd11Q8K485 232 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 D8Ertd738eQ8R1F0 94 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Fads1Q920L1 447 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Ifi44lQ9BDB7 447 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Snap29Q9ERB0 260 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 C1qtnf3Q9ES30 246 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Zfp992B1ASD8 573 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Znf143O70230 638 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Eno2P17183 434 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 PlaaP27612 794 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Ptger3P30557 365 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Htr5bP31387 370 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Etv2P41163 335 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 March5Q3KNM2 278 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Sdf4Q61112 361 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Ddx51Q6P9R1 639 aaKnown RBP18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 RimklaQ6PFX8 380 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Wipi2Q80W47 445 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 DglucyQ8BH86 617 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Nim1kQ8BHI9 436 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Fndc3aQ8BX90 1198 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Znf668Q8K2R5 619 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 MfrpQ8K480 584 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Kcnc4Q8R1C0 628 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Kdelr3Q8R1L4 214 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Zfp991Q8R1N3 573 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Vmn1r198Q8R263 300 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Cd209eQ91ZW7 208 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Mrpl1Q99N96 336 aaKnown RBP18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Rpl17Q9CPR4 184 aaKnown RBP18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Tmbim6Q9D2C7 237 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Duoxa2Q9D311 320 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Gsdmdc1Q9D8T2 487 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Nipa2Q9JJC8 359 aa18.14■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Gm21083A0A0G2JFD5 256 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Olfr675A0A1B0GSE1 317 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Ism1A2ATD1 454 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Vmn2r8L7N472 848 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Ppp3ccP48455 513 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Rab8aP55258 207 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Neurog1P70660 244 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Ctps1P70698 591 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Hesx1Q61658 185 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Zfp324Q78F42 583 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Dlgap2Q8BJ42 1059 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Tspan12Q8BKT6 305 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Hs3st5Q8BSL4 346 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Ttc24Q8BYG0 334 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Ago1Q8CJG1 857 aaKnown RBP18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Mcoln3Q8R4F0 553 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Frmd4bQ920B0 1035 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Cers2Q924Z4 380 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 KelQ9EQF2 713 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Slc13a2Q9ES88 586 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Prokr1Q9JKL1 393 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Cyp4a29A0A087WPC3 509 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Rpl9-ps6A0A140T8T4 192 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 L3mbtl1A2A5N8 826 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Pabpc4lG5E8X2 370 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Capn5O08688 640 aaKnown RBP18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Ech1O35459 327 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Psmb10O35955 273 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 ApoeP08226 311 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 MaptP10637 733 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Gnrh1P13562 90 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 SrgnP13609 152 aa18.13■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms