RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 EcdQ9CS74 641 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Sppl3Q9CUS9 384 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Ift27Q9D0P8 186 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Ndufb10Q9DCS9 176 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Clec4aQ9QZ15 238 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Itga8A2ARA8 1062 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Znf382B2RXC5 579 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Acp4D3YTS9 425 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 4930467E23RikD3Z1P8 350 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gm15319E9Q637 350 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Pdzd7E9Q9W7 1021 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Clcn7O70496 803 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Ap2m1P84091 435 aaKnown RBP4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Npy2rP97295 381 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 RhocQ62159 193 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Taf1cQ6PDZ2 836 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gm21119Q8C646 350 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Plekhn1Q8C886 359 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 DguokQ9QX60 277 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 SpastQ9QYY8 614 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Urb1Q571H0 2274 aaKnown RBP4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gm5788A0A1Y7VK80 144 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gm14459A2BI73 179 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 ChkaO54804 453 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Cd70O55237 195 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Atp5a1Q03265 553 aaKnown RBP4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Cpne9Q1RLL3 553 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Arnt2Q61324 712 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Nr6a1Q64249 495 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Katnal1Q8K0T4 488 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Olfr397Q8VEZ6 315 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Nrif1Q923B3 828 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Chst12Q99LL3 419 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Ift43Q9DA69 206 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Epb41l1Q9Z2H5 879 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Ino80eA0A0U1RP99 260 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Klhdc7bA0A286YD60 1263 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Zscan5bB2RTN3 468 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gm8220F6YKI2 213 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 4933408B17RikG3X9B4 273 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Pdlim1O70400 327 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 SgcgP82348 291 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Tgm3Q08189 693 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 1810065E05RikQ5NC41 235 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 IspdQ5RJG7 447 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Commd7Q8BG94 200 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Q8C4P0 716 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 RnpepQ8VCT3 650 aaKnown RBP4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Paip1Q8VE62 400 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 OgfrQ99PG2 633 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Zbtb8aQ9CWH1 434 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Kiaa0141Q9DCV6 510 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Scn2aA0A0J9YTW6 2006 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Trmt1lA2RSY6 728 aaKnown RBP4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Mapk12O08911 367 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Slc2a2P14246 523 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Epb42P49222 691 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Pld2P97813 933 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 CblbQ3TTA7 982 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Garem1Q3UFT3 876 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Fam196aQ3USH1 422 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Spata13Q5DU57 656 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Abcd2Q61285 741 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 DazlQ64368 298 aaKnown RBP4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Hist2h2abQ64522 130 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Tas2r134Q7TQB0 298 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Ddhd2Q80Y98 699 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Acat2Q8CAY6 397 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Wnt9aQ8R5M2 365 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Sdcbp2Q99JZ0 292 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 TomtA1Y9I9 258 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Yme1l1O88967 715 aaKnown RBP4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 IapP03975 557 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 ItgamP05555 1153 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Il6P08505 211 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Hnf4aP49698 474 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Nfatc3P97305 1075 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Arl14Q3SXC5 192 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Fam35aQ3UEN2 891 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Tp53i13Q5F267 385 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Q80VP5 184 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Cpne3Q8BT60 533 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Kcnk10Q8BUW1 535 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Ston2Q8BZ60 895 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Nt5dc1Q8C5P5 467 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Sdhaf2Q8C6I2 164 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Aqp12Q8CHJ2 290 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Acsl5Q8JZR0 683 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Myoz3Q8R4E4 245 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Atxn7Q8R4I1 867 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 HemgnQ9ERZ0 503 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Tnfsf13bQ9WU72 309 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Dock2Q8C3J5 1828 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Qrich2A0A140LIY9 2337 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Cyp4a12bA2A974 508 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gm13078A2AGW8 474 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gm21973F6WEZ7 68 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Vmn2r75G5E8Z7 853 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 Gm6408J3QNG1 320 aa4.52□□□□□ -1.69
Prkdc-201ENSMUST00000023352 LdlrP35951 862 aa4.52□□□□□ -1.69
Retrieved 100 of 22,080 RNA–protein pairs in 68.8 ms