RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 PRR23CQ6ZRP0 262 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 TAF8Q7Z7C8 310 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 AMZ2Q86W34 360 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 KRT222Q8N1A0 295 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 GPBAR1Q8TDU6 330 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 CPNE1Q99829 537 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 CCM2Q9BSQ5 444 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 CCDC68Q9H2F9 335 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 KLC4Q9NSK0 619 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 UCKL1Q9NWZ5 548 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 TXNDC16Q9P2K2 825 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 FAM8A1Q9UBU6 413 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 KCNK6Q9Y257 313 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 DNAJC16Q9Y2G8 782 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 ST14Q9Y5Y6 855 aa15.37■□□□□ 0.05
PCDHGC3-204ENST00000617222 MGAT4DA6NG13 374 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 H3BMM5 538 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 CDX4O14627 284 aaPredicted RBP15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 YKT6O15498 198 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 AQP9O43315 295 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 ERLIN1O75477 346 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 FAM155BO75949 473 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 FTH1P02794 183 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 DGKAP23743 735 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 EPHA8P29322 1005 aaPredicted RBP15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 HSD17B3P37058 310 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 GP5P40197 560 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 ARHGAP8P85298 464 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 ILF3Q12906 894 aaKnown RBP eCLIP15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 NAB1Q13506 487 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 LRP8Q14114 963 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 ELOCQ15369 112 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 KLHL38Q2WGJ6 581 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 NRROSQ86YC3 692 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 GATAD2AQ86YP4 633 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 SLC25A45Q8N413 288 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 FSTL5Q8N475 847 aaPredicted RBP15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 GPATCH11Q8N954 259 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 ZNF548Q8NEK5 533 aaPredicted RBP15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 LKAAEAR1Q8TD35 194 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 SAP25Q8TEE9 199 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 FAM136AQ96C01 138 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 ATXN7L3BQ96GX2 97 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 LINC00615Q96LM1 132 aaPredicted RBP15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 NDNQ99608 321 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 TIMM29Q9BSF4 260 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 AARSD1Q9BTE6 412 aaKnown RBP15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 EDEM2Q9BV94 578 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 GSDMCQ9BYG8 508 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 PLXNB3Q9ULL4 1909 aa15.36■□□□□ 0.05
PCDHGC3-204ENST00000617222 POC1B-GALNT4F8VUJ3 575 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 YY2O15391 372 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 KCNJ13O60928 360 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 NIPSNAP2O75323 286 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 ANXA6P08133 673 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 VCLP18206 1134 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 CHRM3P20309 590 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 ACTR1BP42025 376 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 CSE1LP55060 971 aaKnown RBP15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 ACTR1AP61163 376 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 NFE2L1Q14494 772 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 RBM20Q5T481 1227 aaKnown RBP15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 GRTP1Q5TC63 336 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 SLC30A9Q6PML9 568 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 NAPRTQ6XQN6 538 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 ZC3HC1Q86WB0 502 aaKnown RBP15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 GKN2Q86XP6 184 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 CFAP206Q8IYR0 622 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 OR2L2Q8NH16 312 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 ELMO1Q92556 727 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 PANX3Q96QZ0 392 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 TSSK1BQ9BXA7 367 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 OSGEPL1Q9H4B0 414 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 RHOJQ9H4E5 214 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 SARS2Q9NP81 518 aaKnown RBP15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 TMEM9BQ9NQ34 198 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 DNAAF2Q9NVR5 837 aaKnown RBP15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 DOLKQ9UPQ8 538 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 PCDH15Q96QU1 1955 aa15.35■□□□□ 0.05
PCDHGC3-204ENST00000617222 EP300Q09472 2414 aaPredicted RBP15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 C17orf113A0A1B0GUU1 675 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 EXOC1LA0A1B0GW35 172 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 CCDC151A5D8V7 595 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 NEMP2A6NFY4 417 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 C4orf47A7E2U8 309 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 E5RI56 91 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 LMO7DNF2Z398 122 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 FOXD2O60548 495 aaPredicted RBP15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 GFRA3O60609 400 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 SNX2O60749 519 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 CCR7P32248 378 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 MSH2P43246 934 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 DEFB133Q30KQ1 61 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 UAP1L1Q3KQV9 507 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 FAM83HQ6ZRV2 1179 aaPredicted RBP15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 KANSL1Q7Z3B3 1105 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 MREGQ8N565 214 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 LILRA3Q8N6C8 439 aaPredicted RBP15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 FAM46DQ8NEK8 389 aa15.34■□□□□ 0.05
PCDHGC3-204ENST00000617222 ACVR1CQ8NER5 493 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms