RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 ZCCHC7Q8N3Z6 543 aaKnown RBP21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 CCDC185Q8N715 623 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 CCNYQ8ND76 341 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 HSFY1Q96LI6 401 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 MUS81Q96NY9 551 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 KIFC1Q9BW19 673 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 HOXD1Q9GZZ0 328 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 ANKHQ9HCJ1 492 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 POU2F3Q9UKI9 436 aa21.7■■□□□ 1.06
POLR2J3-220ENST00000613744 ELK4P28324 431 aa21.69■■□□□ 1.06
POLR2J3-220ENST00000613744 ALDH3A2P51648 485 aa21.69■■□□□ 1.06
POLR2J3-220ENST00000613744 PPP1R3AQ16821 1122 aa21.69■■□□□ 1.06
POLR2J3-220ENST00000613744 PDZD4Q76G19 769 aaPredicted RBP21.69■■□□□ 1.06
POLR2J3-220ENST00000613744 ARMC8Q8IUR7 673 aa21.69■■□□□ 1.06
POLR2J3-220ENST00000613744 SLC22A9Q8IVM8 553 aa21.69■■□□□ 1.06
POLR2J3-220ENST00000613744 KREMEN2Q8NCW0 462 aa21.69■■□□□ 1.06
POLR2J3-220ENST00000613744 ELMO2Q96JJ3 720 aa21.69■■□□□ 1.06
POLR2J3-220ENST00000613744 SLC39A3Q9BRY0 314 aa21.69■■□□□ 1.06
POLR2J3-220ENST00000613744 NECTIN3Q9NQS3 549 aa21.69■■□□□ 1.06
POLR2J3-220ENST00000613744 CMTM6Q9NX76 183 aa21.69■■□□□ 1.06
POLR2J3-220ENST00000613744 TRHDEQ9UKU6 1024 aa21.69■■□□□ 1.06
POLR2J3-220ENST00000613744 HCFC2Q9Y5Z7 792 aa21.69■■□□□ 1.06
POLR2J3-220ENST00000613744 PRRC2BQ5JSZ5 2229 aaKnown RBP21.69■■□□□ 1.06
POLR2J3-220ENST00000613744 ANGPT2O15123 496 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 PSMD3O43242 534 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 MATN4O95460 622 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 ACADSBP45954 432 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 IFITM3Q01628 133 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 SMARCB1Q12824 385 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 CRY1Q16526 586 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 TCEAL5Q5H9L2 206 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 LDLRAP1Q5SW96 308 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 TTC23Q5W5X9 447 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 SLCO6A1Q86UG4 719 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 AKAP14Q86UN6 197 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 C8orf59Q8N0T1 100 aaPredicted RBP21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 PHF10Q8WUB8 498 aaKnown RBP21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 AURKBQ96GD4 344 aaPredicted RBP21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 CSNK1G1Q9HCP0 422 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 GMPR2Q9P2T1 348 aaKnown RBP21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 WARS2Q9UGM6 360 aaKnown RBP21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 NAALAD2Q9Y3Q0 740 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 PCDHA9Q9Y5H5 950 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 A0A0J9YYE9 177 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 ANKRD34BA5PLL1 514 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 H0Y858 1186 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 GABARAPO95166 117 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 HNRNPLP14866 589 aaKnown RBP eCLIP21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 ATF6P18850 670 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 SLC6A2P23975 617 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 PTPN3P26045 913 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 CTF1Q16619 201 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 SCML4Q8N228 414 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 SCAMP5Q8TAC9 235 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 C2orf15Q8WU43 125 aaKnown RBP21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 SIAEQ9HAT2 523 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 EGFL7Q9UHF1 273 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 VPS51Q9UID3 782 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 BAG5Q9UL15 447 aa21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 RBMX2Q9Y388 322 aaKnown RBP21.68■■□□□ 1.06
POLR2J3-220ENST00000613744 FAM95CA0A1B0GW59 222 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 TYW5A2RUC4 315 aaKnown RBP21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 UBXN8O00124 270 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 FXYD1O00168 92 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 NCAM2O15394 837 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 IPO13O94829 963 aaKnown RBP21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 AVPR1AP37288 418 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 TWF1Q12792 350 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 DAG1Q14118 895 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 CERCAMQ5T4B2 595 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 UGT3A1Q6NUS8 523 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 OR6Q1Q8NGQ2 317 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 OR9I1Q8NGQ6 314 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 LILRB4Q8NHJ6 448 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 CALML6Q8TD86 181 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 RNF139Q8WU17 664 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 CEP41Q9BYV8 373 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 FBXW11Q9UKB1 542 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 YIPF1Q9Y548 306 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 SNX5Q9Y5X3 404 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 HHLA1C9JL84 531 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 INPP4BO15327 924 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 RFPL2O75678 378 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 AHSGP02765 367 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 C8AP07357 584 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 USP17L7P0C7H9 530 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 SAT1P21673 171 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 HTR1BP28222 390 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 SHMT2P34897 504 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 EEFSECP57772 596 aaKnown RBP21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 TECRLQ5HYJ1 363 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 HABP4Q5JVS0 413 aaKnown RBP21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 R3HCC1LQ7Z5L2 792 aaKnown RBP21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 BPIFB1Q8TDL5 484 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 ZFP90Q8TF47 636 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 SLC22A17Q8WUG5 538 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 KCTD13Q8WZ19 329 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 FAM149B1Q96BN6 582 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 LRRC58Q96CX6 371 aa21.67■■□□□ 1.06
POLR2J3-220ENST00000613744 HDAC11Q96DB2 347 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms