RNA–Protein interactions for RNA: ENST00000611553.4

CBWD6-211, Transcript of COBW domain containing 6, humanhuman

TSL 1 (best)

Gene CBWD6, Length 2,996 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6-211ENST00000611553 HPSEQ9Y251 543 aa4.09□□□□□ -1.75
CBWD6-211ENST00000611553 PCDHB11Q9Y5F2 797 aa4.09□□□□□ -1.75
CBWD6-211ENST00000611553 HRH3Q9Y5N1 445 aa4.09□□□□□ -1.75
CBWD6-211ENST00000611553 AUP1Q9Y679 476 aa4.09□□□□□ -1.75
CBWD6-211ENST00000611553 TEX264Q9Y6I9 313 aa4.09□□□□□ -1.75
CBWD6-211ENST00000611553 KDM5AP29375 1690 aaKnown RBP4.09□□□□□ -1.76
CBWD6-211ENST00000611553 MAP2P11137 1827 aaKnown RBP4.09□□□□□ -1.76
CBWD6-211ENST00000611553 ARHGEF5Q12774 1597 aa4.09□□□□□ -1.76
CBWD6-211ENST00000611553 WDR17Q8IZU2 1322 aa4.09□□□□□ -1.76
CBWD6-211ENST00000611553 IFT172Q9UG01 1749 aa4.09□□□□□ -1.76
CBWD6-211ENST00000611553 PRXQ9BXM0 1461 aa4.09□□□□□ -1.76
CBWD6-211ENST00000611553 DUOX2Q9NRD8 1548 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 TCP11X1B4DZS4 312 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 CBX4O00257 560 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 NOP56O00567 594 aaKnown RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 TRAFD1O14545 582 aaPredicted RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 TSPAN4O14817 238 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 SLC16A3O15427 465 aaKnown RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 NPHS1O60500 1241 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 TOM1O60784 492 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 SCGB2A1O75556 95 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 KAT7O95251 611 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 HTR3BO95264 441 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 IL1BP01584 269 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 PGK2P07205 417 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 PLEKP08567 350 aaPredicted RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 JUNDP17535 347 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 PRPS1L1P21108 318 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 GIFP27352 417 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 SFNP31947 248 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 RYKP34925 604 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 CLCN7P51798 805 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 STX1BP61266 288 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 SOX4Q06945 474 aaPredicted RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 BAMBIQ13145 260 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 SNTB2Q13425 540 aaKnown RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 ADGRE1Q14246 886 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 SNX17Q15036 470 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 PDK2Q15119 407 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 USF2Q15853 346 aaPredicted RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 SSX2Q16385 188 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 PAN2Q504Q3 1202 aaKnown RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 EPC2Q52LR7 807 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 FASTKD1Q53R41 847 aaKnown RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 ZMAT1Q5H9K5 638 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 TCHHL1Q5QJ38 904 aaPredicted RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 FUT10Q6P4F1 479 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 PSRC1Q6PGN9 363 aaPredicted RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 C11orf57Q6ZUT1 292 aaPredicted RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 GPRIN3Q6ZVF9 776 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 BBS12Q6ZW61 710 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 REC114Q7Z4M0 266 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 SLC13A5Q86YT5 568 aaPredicted RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 RASGRP3Q8IV61 690 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 SLC9A9Q8IVB4 645 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 FRMD1Q8N878 549 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 TERB1Q8NA31 727 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 STEAP2Q8NFT2 490 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 OR52E1Q8NGJ3 308 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 LRRC20Q8TCA0 184 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 SNX29Q8TEQ0 813 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 CKAP2Q8WWK9 683 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 RLN3Q8WXF3 142 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 THAP4Q8WY91 577 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 CORO2AQ92828 525 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 APBB2Q92870 758 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 SEC22CQ9BRL7 303 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 UBAC1Q9BSL1 405 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 SLC12A9Q9BXP2 914 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 OPN3Q9H1Y3 402 aaPredicted RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 MUC13Q9H3R2 512 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 RBAKQ9NYW8 714 aaPredicted RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 GRHL1Q9NZI5 618 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 GULP1Q9UBP9 304 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 APEX2Q9UBZ4 518 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 SRRDQ9UH36 339 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 PCDHA6Q9UN73 950 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 PCDHA8Q9Y5H6 950 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 U3KQV3 271 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 SALL1Q9NSC2 1324 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 SYNJ2O15056 1496 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 URB2Q14146 1524 aaKnown RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 FAM230AA0A1W2PPH8 454 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 TRBC2A0A5B9 178 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 E5RI56 91 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 NRG2O14511 850 aaPredicted RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 COCHO43405 550 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 CCNKO75909 580 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 IFNA16P05015 189 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 ANXA5P08758 320 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 ERCC2P18074 760 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 CST5P28325 142 aaPredicted RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 TACR3P29371 465 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 YWHABP31946 246 aaKnown RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 SLCO1A2P46721 670 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 PPP3CCP48454 512 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 P2RY4P51582 365 aa4.08□□□□□ -1.76
CBWD6-211ENST00000611553 RIDAP52758 137 aaKnown RBP4.08□□□□□ -1.76
CBWD6-211ENST00000611553 CEBPGP53567 150 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms