RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 TMEM135Q86UB9 458 aa17.63■□□□□ 0.41
CHMP2A-208ENST00000601220 AMZ2Q86W34 360 aa17.63■□□□□ 0.41
CHMP2A-208ENST00000601220 RASGRP3Q8IV61 690 aa17.63■□□□□ 0.41
CHMP2A-208ENST00000601220 ZNF567Q8N184 647 aa17.63■□□□□ 0.41
CHMP2A-208ENST00000601220 DDHD1Q8NEL9 900 aa17.63■□□□□ 0.41
CHMP2A-208ENST00000601220 CCDC42Q96M95 316 aa17.63■□□□□ 0.41
CHMP2A-208ENST00000601220 INTUQ9ULD6 942 aa17.63■□□□□ 0.41
CHMP2A-208ENST00000601220 DNMT3AQ9Y6K1 912 aaPredicted RBP17.63■□□□□ 0.41
CHMP2A-208ENST00000601220 RECKO95980 971 aa17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 TNNT1P13805 278 aa17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 FOLR1P15328 257 aa17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 VCLP18206 1134 aa17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 FECHP22830 423 aa17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 SPAM1P38567 509 aa17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 TFDP2Q14188 446 aa17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 ERV3-1Q14264 604 aa17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 SLC1A5Q15758 541 aa17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 LACTB2Q53H82 288 aaPredicted RBP17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 ZDHHC20Q5W0Z9 365 aa17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 IRGCQ6NXR0 463 aa17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 TMEM220Q6QAJ8 160 aa17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 FAM151BQ6UXP7 276 aa17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 SPOCD1Q6ZMY3 1216 aa17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 SLC25A41Q8N5S1 370 aa17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 GDAP1Q8TB36 358 aa17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 AKIRIN1Q9H9L7 192 aaPredicted RBP17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 ALG6Q9Y672 507 aa17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 COL12A1Q99715 3063 aa17.62■□□□□ 0.41
CHMP2A-208ENST00000601220 BUD23O43709 281 aaKnown RBP17.61■□□□□ 0.41
CHMP2A-208ENST00000601220 GTF2H3Q13889 308 aa17.61■□□□□ 0.41
CHMP2A-208ENST00000601220 NFE2L1Q14494 772 aa17.61■□□□□ 0.41
CHMP2A-208ENST00000601220 PTPRCAPQ14761 206 aa17.61■□□□□ 0.41
CHMP2A-208ENST00000601220 LDLRAP1Q5SW96 308 aa17.61■□□□□ 0.41
CHMP2A-208ENST00000601220 GPRC6AQ5T6X5 926 aa17.61■□□□□ 0.41
CHMP2A-208ENST00000601220 METRNLQ641Q3 311 aa17.61■□□□□ 0.41
CHMP2A-208ENST00000601220 PWWP2BQ6NUJ5 590 aa17.61■□□□□ 0.41
CHMP2A-208ENST00000601220 CERS6Q6ZMG9 384 aa17.61■□□□□ 0.41
CHMP2A-208ENST00000601220 PPP1R3BQ86XI6 285 aa17.61■□□□□ 0.41
CHMP2A-208ENST00000601220 STAMBPL1Q96FJ0 436 aa17.61■□□□□ 0.41
CHMP2A-208ENST00000601220 GORASP1Q9BQQ3 440 aa17.61■□□□□ 0.41
CHMP2A-208ENST00000601220 LHX9Q9NQ69 397 aa17.61■□□□□ 0.41
CHMP2A-208ENST00000601220 HACD3Q9P035 362 aa17.61■□□□□ 0.41
CHMP2A-208ENST00000601220 LNPEPQ9UIQ6 1025 aa17.61■□□□□ 0.41
CHMP2A-208ENST00000601220 PADI1Q9ULC6 663 aa17.61■□□□□ 0.41
CHMP2A-208ENST00000601220 TP53TG5Q9Y2B4 290 aa17.61■□□□□ 0.41
CHMP2A-208ENST00000601220 PCDHB3Q9Y5E6 796 aa17.61■□□□□ 0.41
CHMP2A-208ENST00000601220 NAV2Q8IVL1 2488 aa17.61■□□□□ 0.41
CHMP2A-208ENST00000601220 hCG_1818297A0A087WSY0 165 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 GLYATL1P3A0A0U1RQE8 302 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 F5H423 210 aaPredicted RBP17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 MTSS1O43312 755 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 CBFA2T2O43439 604 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 PSTPIP1O43586 416 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 CREG1O75629 220 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 NR1D1P20393 614 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 HALP42357 657 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 HADHBP55084 474 aaKnown RBP17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 DNASE1L3Q13609 305 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 LAMB3Q13751 1172 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 SEPT6Q14141 434 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 UBAP2LQ14157 1087 aaKnown RBP17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 KCNAB1Q14722 419 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 KAZNQ674X7 775 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 TCTN3Q6NUS6 607 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 PID1Q7Z2X4 250 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 ZC3H18Q86VM9 953 aaKnown RBP17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 BLOC1S5Q8TDH9 187 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 CT55Q8WUE5 264 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 UBXN4Q92575 508 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 TTC25Q96NG3 672 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 FCRL4Q96PJ5 515 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 INSM2Q96T92 566 aaPredicted RBP17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 VAT1Q99536 393 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 MAP3K3Q99759 626 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 GOLPH3Q9H4A6 298 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 SMOXQ9NWM0 555 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 KLHL8Q9P2G9 620 aaPredicted RBP17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 KCND3Q9UK17 655 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 PSMD13Q9UNM6 376 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 POLHQ9Y253 713 aa17.6■□□□□ 0.41
CHMP2A-208ENST00000601220 OR2AG2A6NM03 316 aa17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 SPOPO43791 374 aa17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 KATNA1O75449 491 aa17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 CCNYL3P0C7X3 344 aa17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 HLA-DPA1P20036 260 aa17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 MARCKSL1P49006 195 aa17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 KLRB1Q12918 225 aa17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 TBX2Q13207 712 aaPredicted RBP17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 MPP3Q13368 585 aa17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 MSLNQ13421 630 aaPredicted RBP17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 PPP2R5EQ16537 467 aa17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 ODF2Q5BJF6 829 aa17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 TFDP3Q5H9I0 405 aa17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 GLT6D1Q7Z4J2 308 aa17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 KATNAL2Q8IYT4 538 aa17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 BEND7Q8N7W2 519 aaPredicted RBP17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 IPMKQ8NFU5 416 aa17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 P3H4Q92791 437 aa17.59■□□□□ 0.41
CHMP2A-208ENST00000601220 MIB2Q96AX9 1013 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms