RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 ILF3Q12906 894 aaKnown RBP eCLIP12.5□□□□□ -0.41
MKS1-206ENST00000577824 ELOCQ15369 112 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 SMAD1Q15797 465 aaKnown RBP12.5□□□□□ -0.41
MKS1-206ENST00000577824 KBTBD12Q3ZCT8 623 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 ZNF542PQ5EBM4 170 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 TMEM220Q6QAJ8 160 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 DCLK2Q8N568 766 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 MYRIPQ8NFW9 859 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 OR2L2Q8NH16 312 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 HM13Q8TCT9 377 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 KCNJ9Q92806 393 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 SGF29Q96ES7 293 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 CYTH2Q99418 400 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 TMEM168Q9H0V1 697 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 PPANQ9NQ55 473 aaKnown RBP12.5□□□□□ -0.41
MKS1-206ENST00000577824 FBXO6Q9NRD1 293 aaPredicted RBP12.5□□□□□ -0.41
MKS1-206ENST00000577824 LATS2Q9NRM7 1088 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 RXFP3Q9NSD7 469 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 FETUBQ9UGM5 382 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 MED16Q9Y2X0 877 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 ADAMTS9Q9P2N4 1935 aa12.5□□□□□ -0.41
MKS1-206ENST00000577824 A0A087WUV0 522 aaPredicted RBP12.49□□□□□ -0.41
MKS1-206ENST00000577824 CCDC151A5D8V7 595 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 MGAT4DA6NG13 374 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 TPP1O14773 563 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 SCAMP1O15126 338 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 GFRA3O60609 400 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 ACSL3O95573 720 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 PKMP14618 531 aaKnown RBP12.49□□□□□ -0.41
MKS1-206ENST00000577824 CD151P48509 253 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 ATXN3P54252 364 aaPredicted RBP12.49□□□□□ -0.41
MKS1-206ENST00000577824 CTBSQ01459 385 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 GBX1Q14549 363 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 UAP1Q16222 522 aaPredicted RBP12.49□□□□□ -0.41
MKS1-206ENST00000577824 KLHL38Q2WGJ6 581 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 PRRT3Q5FWE3 981 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 ZNF549Q6P9A3 640 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 LVRNQ6Q4G3 990 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 CRTC3Q6UUV7 619 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 DET1Q7L5Y6 550 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 ZC3HC1Q86WB0 502 aaKnown RBP12.49□□□□□ -0.41
MKS1-206ENST00000577824 SLC25A45Q8N413 288 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 OR2I1PQ8NGU4 316 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 PANX3Q96QZ0 392 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 CPNE1Q99829 537 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 GTPBP2Q9BX10 602 aaKnown RBP12.49□□□□□ -0.41
MKS1-206ENST00000577824 TSSK1BQ9BXA7 367 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 GSDMCQ9BYG8 508 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 RHOJQ9H4E5 214 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 CAAP1Q9H8G2 361 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 TMEM9BQ9NQ34 198 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 TM7SF3Q9NS93 570 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 KLHL42Q9P2K6 505 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 SLC23A2Q9UGH3 650 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 ZNHIT2Q9UHR6 403 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 PCOLCE2Q9UKZ9 415 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 PRKAB1Q9Y478 270 aa12.49□□□□□ -0.41
MKS1-206ENST00000577824 UBA6A0AVT1 1052 aaPredicted RBP12.48□□□□□ -0.41
MKS1-206ENST00000577824 HAUS5O94927 633 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 CELA2BP08218 269 aaPredicted RBP12.48□□□□□ -0.41
MKS1-206ENST00000577824 ACP5P13686 325 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 VCLP18206 1134 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 GP5P40197 560 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 LIMK2P53671 638 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 EIF3BP55884 814 aaKnown RBP12.48□□□□□ -0.41
MKS1-206ENST00000577824 ARHGAP8P85298 464 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 BNIP3Q12983 259 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 RPA4Q13156 261 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 EFTUD2Q15029 972 aaKnown RBP eCLIP12.48□□□□□ -0.412e-7■■□□□ 14.1
MKS1-206ENST00000577824 INSCQ1MX18 579 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 MAP9Q49MG5 647 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 AASDHQ4L235 1098 aaPredicted RBP12.48□□□□□ -0.41
MKS1-206ENST00000577824 PRAMEF14Q5SWL7 426 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 CNSTQ6PJW8 725 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 WASH2PQ6VEQ5 465 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 CHST15Q7LFX5 561 aaPredicted RBP12.48□□□□□ -0.41
MKS1-206ENST00000577824 STRA8Q7Z7C7 330 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 AMZ2Q86W34 360 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 GKN2Q86XP6 184 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 BEND7Q8N7W2 519 aaPredicted RBP12.48□□□□□ -0.41
MKS1-206ENST00000577824 OR4C6Q8NH72 309 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 CCL4L1Q8NHW4 92 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 LKAAEAR1Q8TD35 194 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 NAT14Q8WUY8 206 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 RBBP8Q99708 897 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 CCM2Q9BSQ5 444 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 AARSD1Q9BTE6 412 aaKnown RBP12.48□□□□□ -0.41
MKS1-206ENST00000577824 DHRS4Q9BTZ2 278 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 WASH6PQ9NQA3 447 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 UCKL1Q9NWZ5 548 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 NLGN3Q9NZ94 848 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 MOSPD1Q9UJG1 213 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 ZNF180Q9UJW8 692 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 CRYL1Q9Y2S2 319 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 GPSM3Q9Y4H4 160 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 RALGAPA1Q6GYQ0 2036 aa12.48□□□□□ -0.41
MKS1-206ENST00000577824 EP300Q09472 2414 aaPredicted RBP12.48□□□□□ -0.41
MKS1-206ENST00000577824 SLC5A10A0PJK1 596 aa12.47□□□□□ -0.41
MKS1-206ENST00000577824 NEMP2A6NFY4 417 aa12.47□□□□□ -0.41
MKS1-206ENST00000577824 LIN7AO14910 233 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms