RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 UBAP2Q5T6F2 1119 aaKnown RBP16.82■□□□□ 0.28
NUP88-210ENST00000574867 STRA8Q7Z7C7 330 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 AMZ2Q86W34 360 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 GPBAR1Q8TDU6 330 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 LMX1AQ8TE12 382 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 PANX3Q96QZ0 392 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 TMEM9BQ9NQ34 198 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 PSAT1Q9Y617 370 aa16.82■□□□□ 0.28
NUP88-210ENST00000574867 C17orf113A0A1B0GUU1 675 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 NEMP2A6NFY4 417 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 SDC3O75056 442 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 ERLIN1O75477 346 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 HAUS5O94927 633 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 AHSGP02765 367 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 PKMP14618 531 aaKnown RBP16.81■□□□□ 0.28
NUP88-210ENST00000574867 DGKAP23743 735 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 FMO4P31512 558 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 CLCNKAP51800 687 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 CSE1LP55060 971 aaKnown RBP16.81■□□□□ 0.28
NUP88-210ENST00000574867 CTBSQ01459 385 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 DMPKQ09013 629 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 PLA2G4EQ3MJ16 856 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 CTSL3PQ5NE16 218 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 GKN2Q86XP6 184 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 BEND7Q8N7W2 519 aaPredicted RBP16.81■□□□□ 0.28
NUP88-210ENST00000574867 OR2I1PQ8NGU4 316 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 HM13Q8TCT9 377 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 SAP25Q8TEE9 199 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 UBLCP1Q8WVY7 318 aaPredicted RBP16.81■□□□□ 0.28
NUP88-210ENST00000574867 CCM2Q9BSQ5 444 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 TM7SF3Q9NS93 570 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 PCDHGB2Q9Y5G2 931 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 MGAT4DA6NG13 374 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 CXorf49A8MYA2 514 aaPredicted RBP16.81■□□□□ 0.28
NUP88-210ENST00000574867 SCAMP1O15126 338 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 GFRA3O60609 400 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 POP7O75817 140 aaKnown RBP16.81■□□□□ 0.28
NUP88-210ENST00000574867 GABRB3P28472 473 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 GP5P40197 560 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 CNSTQ6PJW8 725 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 PPM1NQ8N819 430 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 OR2L2Q8NH16 312 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 NAT14Q8WUY8 206 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 RHOJQ9H4E5 214 aa16.81■□□□□ 0.28
NUP88-210ENST00000574867 ZFC3H1O60293 1989 aaKnown RBP16.8■□□□□ 0.28
NUP88-210ENST00000574867 TDRD6O60522 2096 aaKnown RBP16.8■□□□□ 0.28
NUP88-210ENST00000574867 CCDC151A5D8V7 595 aa16.8■□□□□ 0.28
NUP88-210ENST00000574867 LMO7DNF2Z398 122 aa16.8■□□□□ 0.28
NUP88-210ENST00000574867 F7P08709 466 aaPredicted RBP16.8■□□□□ 0.28
NUP88-210ENST00000574867 ACTR1BP42025 376 aa16.8■□□□□ 0.28
NUP88-210ENST00000574867 ACTR1AP61163 376 aa16.8■□□□□ 0.28
NUP88-210ENST00000574867 IL9RQ01113 521 aa16.8■□□□□ 0.28
NUP88-210ENST00000574867 SLC14A1Q13336 389 aa16.8■□□□□ 0.28
NUP88-210ENST00000574867 BRD3Q15059 726 aa16.8■□□□□ 0.28
NUP88-210ENST00000574867 INAVAQ3KP66 663 aa16.8■□□□□ 0.28
NUP88-210ENST00000574867 LVRNQ6Q4G3 990 aa16.8■□□□□ 0.28
NUP88-210ENST00000574867 KANSL1Q7Z3B3 1105 aa16.8■□□□□ 0.28
NUP88-210ENST00000574867 TAF8Q7Z7C8 310 aa16.8■□□□□ 0.28
NUP88-210ENST00000574867 KCNJ9Q92806 393 aa16.8■□□□□ 0.28
NUP88-210ENST00000574867 EPB41L4BQ9H329 900 aa16.8■□□□□ 0.28
NUP88-210ENST00000574867 KLC4Q9NSK0 619 aa16.8■□□□□ 0.28
NUP88-210ENST00000574867 DOLKQ9UPQ8 538 aa16.8■□□□□ 0.28
NUP88-210ENST00000574867 CDX4O14627 284 aaPredicted RBP16.79■□□□□ 0.28
NUP88-210ENST00000574867 ARHGAP8P85298 464 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 BNIP3Q12983 259 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 C1orf61Q13536 156 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 SLC29A2Q14542 456 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 SUZ12Q15022 739 aaKnown RBP16.79■□□□□ 0.28
NUP88-210ENST00000574867 EFTUD2Q15029 972 aaKnown RBP eCLIP16.79■□□□□ 0.28
NUP88-210ENST00000574867 ZC3HC1Q86WB0 502 aaKnown RBP16.79■□□□□ 0.28
NUP88-210ENST00000574867 MREGQ8N565 214 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 MCMBPQ9BTE3 642 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 AARSD1Q9BTE6 412 aaKnown RBP16.79■□□□□ 0.28
NUP88-210ENST00000574867 UCKL1Q9NWZ5 548 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 SLC23A2Q9UGH3 650 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 KCNK6Q9Y257 313 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 PRR19A6NJB7 356 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 E5RI56 91 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 TPP1O14773 563 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 KPNA5O15131 536 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 PIAS1O75925 651 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 ANXA6P08133 673 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 PBLDP30039 288 aaPredicted RBP16.79■□□□□ 0.28
NUP88-210ENST00000574867 GRTP1Q5TC63 336 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 ZNF549Q6P9A3 640 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 NRROSQ86YC3 692 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 CCL4L1Q8NHW4 92 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 RBBP8Q99708 897 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 OSGEPL1Q9H4B0 414 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 RXFP3Q9NSD7 469 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 FETUBQ9UGM5 382 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 PLEKHM1Q9Y4G2 1056 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 ST14Q9Y5Y6 855 aa16.79■□□□□ 0.28
NUP88-210ENST00000574867 EXOC1LA0A1B0GW35 172 aa16.78■□□□□ 0.28
NUP88-210ENST00000574867 LIN7AO14910 233 aaPredicted RBP16.78■□□□□ 0.28
NUP88-210ENST00000574867 TRIM16O95361 564 aa16.78■□□□□ 0.28
NUP88-210ENST00000574867 CELA2BP08218 269 aaPredicted RBP16.78■□□□□ 0.28
NUP88-210ENST00000574867 ALPPL2P10696 532 aa16.78■□□□□ 0.28
NUP88-210ENST00000574867 AK4P27144 223 aaPredicted RBP16.78■□□□□ 0.28
NUP88-210ENST00000574867 SPRP35270 261 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms