RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 OR52A4PA6NMU1 304 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 F8W8V4 182 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 KIR2DS3K7RE56 304 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 AGRPO00253 132 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 CASC3O15234 703 aaKnown RBP12.58□□□□□ -0.4
CDT1-203ENST00000569140 OR1I1O60431 355 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 KCNJ13O60928 360 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 CSO75390 466 aaKnown RBP12.58□□□□□ -0.4
CDT1-203ENST00000569140 NDUFS3O75489 264 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 VIPP01282 170 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 TUBB4AP04350 444 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 SLC35G4P0C7Q5 338 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 OR56A5P0C7T3 313 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 ITGB6P18564 788 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 CLCNKAP51800 687 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 OR1D5P58170 312 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 DHX9Q08211 1270 aaKnown RBP12.58□□□□□ -0.4
CDT1-203ENST00000569140 CALCOCO2Q13137 446 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 TARDBPQ13148 414 aaKnown RBP eCLIP12.58□□□□□ -0.4
CDT1-203ENST00000569140 THOC5Q13769 683 aaKnown RBP12.58□□□□□ -0.4
CDT1-203ENST00000569140 SEMA3AQ14563 771 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 KIR2DS5Q14953 304 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 MORF4L2Q15014 288 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 BRD3Q15059 726 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 WHAMMP3Q1A5X7 153 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 HP1BP3Q5SSJ5 553 aaPredicted RBP12.58□□□□□ -0.4
CDT1-203ENST00000569140 MRNIPQ6NTE8 343 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 ZNF449Q6P9G9 518 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 IYDQ6PHW0 289 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 RBM44Q6ZP01 1051 aaKnown RBP12.58□□□□□ -0.4
CDT1-203ENST00000569140 SPRED1Q7Z699 444 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 C11orf96Q7Z7L8 435 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 SDCCAG8Q86SQ7 713 aaPredicted RBP12.58□□□□□ -0.4
CDT1-203ENST00000569140 CFAP206Q8IYR0 622 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 SFRP1Q8N474 314 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 OR2L2Q8NH16 312 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 KIF18AQ8NI77 898 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 CFAP36Q96G28 342 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 CCM2Q9BSQ5 444 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 WWP1Q9H0M0 922 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 LRRN3Q9H3W5 708 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 IMP3Q9NV31 184 aaKnown RBP12.58□□□□□ -0.4
CDT1-203ENST00000569140 SCHIP1Q9P0W5 487 aaPredicted RBP12.58□□□□□ -0.4
CDT1-203ENST00000569140 MARCH4Q9P2E8 410 aaPredicted RBP12.58□□□□□ -0.4
CDT1-203ENST00000569140 CPNE7Q9UBL6 633 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 ATXN7L1Q9ULK2 861 aaPredicted RBP12.58□□□□□ -0.4
CDT1-203ENST00000569140 UTP11Q9Y3A2 253 aaKnown RBP12.58□□□□□ -0.4
CDT1-203ENST00000569140 DNMT3AQ9Y6K1 912 aaPredicted RBP12.58□□□□□ -0.4
CDT1-203ENST00000569140 PRSS21Q9Y6M0 314 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 BPTFQ12830 3046 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 SPTBN4Q9H254 2564 aa12.58□□□□□ -0.4
CDT1-203ENST00000569140 IGLV3-16A0A075B6K0 115 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 FAM237BA0A1B0GVD1 139 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 MAGEB16A2A368 324 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 NDC80O14777 642 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 PFDN6O15212 129 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 PPM1DO15297 605 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 AP2A2O94973 939 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 SEC31AO94979 1220 aaKnown RBP12.57□□□□□ -0.4
CDT1-203ENST00000569140 FTH1P02794 183 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 PSMA3P25788 255 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 RPL21P46778 160 aaKnown RBP12.57□□□□□ -0.4
CDT1-203ENST00000569140 TTPAP49638 278 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 CSE1LP55060 971 aaKnown RBP12.57□□□□□ -0.4
CDT1-203ENST00000569140 EIF3BP55884 814 aaKnown RBP12.57□□□□□ -0.4
CDT1-203ENST00000569140 ARL4CP56559 192 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 BOP1Q14137 746 aaKnown RBP12.57□□□□□ -0.4
CDT1-203ENST00000569140 KRT33BQ14525 404 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 HIF1AQ16665 826 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 ANKRD20A4Q4UJ75 823 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 NKAIN2Q5VXU1 208 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 PTRHD1Q6GMV3 140 aaKnown RBP12.57□□□□□ -0.4
CDT1-203ENST00000569140 KIAA0930Q6ICG6 404 aaPredicted RBP12.57□□□□□ -0.4
CDT1-203ENST00000569140 HIBCHQ6NVY1 386 aaPredicted RBP12.57□□□□□ -0.4
CDT1-203ENST00000569140 C8orf74Q6P047 294 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 PDIK1LQ8N165 341 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 AVL9Q8NBF6 648 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 BBOF1Q8ND07 529 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 WDR48Q8TAF3 677 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 HM13Q8TCT9 377 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 ELMO1Q92556 727 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 SH3KBP1Q96B97 665 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 C12orf66Q96MD2 445 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 PWWP2AQ96N64 755 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 TSSK1BQ9BXA7 367 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 C20orf96Q9NUD7 363 aaPredicted RBP12.57□□□□□ -0.4
CDT1-203ENST00000569140 CHMP2BQ9UQN3 213 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 WDR37Q9Y2I8 494 aa12.57□□□□□ -0.4
CDT1-203ENST00000569140 CFAP20Q9Y6A4 193 aaKnown RBP12.57□□□□□ -0.4
CDT1-203ENST00000569140 ARID1BQ8NFD5 2236 aaPredicted RBP12.56□□□□□ -0.4
CDT1-203ENST00000569140 KLHL33A6NCF5 533 aa12.56□□□□□ -0.4
CDT1-203ENST00000569140 A6NCN8 305 aa12.56□□□□□ -0.4
CDT1-203ENST00000569140 SMAPO00193 183 aa12.56□□□□□ -0.4
CDT1-203ENST00000569140 QSOX1O00391 747 aa12.56□□□□□ -0.4
CDT1-203ENST00000569140 SGTAO43765 313 aa12.56□□□□□ -0.4
CDT1-203ENST00000569140 USP1O94782 785 aa12.56□□□□□ -0.4
CDT1-203ENST00000569140 PNLIPP16233 465 aa12.56□□□□□ -0.4
CDT1-203ENST00000569140 PGAM1P18669 254 aa12.56□□□□□ -0.4
CDT1-203ENST00000569140 IVDP26440 423 aa12.56□□□□□ -0.4
CDT1-203ENST00000569140 MAGEA3P43357 314 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms