RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 HSD17B3P37058 310 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 GP5P40197 560 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 CSE1LP55060 971 aaKnown RBP15.46■□□□□ 0.07
SPG7-218ENST00000568205 IL9RQ01113 521 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 CTBSQ01459 385 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 ILF3Q12906 894 aaKnown RBP eCLIP15.46■□□□□ 0.07
SPG7-218ENST00000568205 C1orf61Q13536 156 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 TCEA2Q15560 299 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 INSCQ1MX18 579 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 ZNF549Q6P9A3 640 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 PRR23CQ6ZRP0 262 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 AMZ2Q86W34 360 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 ZC3HC1Q86WB0 502 aaKnown RBP15.46■□□□□ 0.07
SPG7-218ENST00000568205 MREGQ8N565 214 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 LKAAEAR1Q8TD35 194 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 LMX1AQ8TE12 382 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 MCMBPQ9BTE3 642 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 CCDC68Q9H2F9 335 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 RHOJQ9H4E5 214 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 CORO1CQ9ULV4 474 aaPredicted RBP15.46■□□□□ 0.07
SPG7-218ENST00000568205 COMMD10Q9Y6G5 202 aa15.46■□□□□ 0.07
SPG7-218ENST00000568205 DMDP11532 3685 aa15.46■□□□□ 0.06
SPG7-218ENST00000568205 RIF1Q5UIP0 2472 aaKnown RBP15.45■□□□□ 0.06
SPG7-218ENST00000568205 VPS13AQ96RL7 3174 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 PLXNB3Q9ULL4 1909 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 EXOC1LA0A1B0GW35 172 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 KLHL33A6NCF5 533 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 MGAT4DA6NG13 374 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 IQCF5A8MTL0 148 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 AQP9O43315 295 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 FOXD2O60548 495 aaPredicted RBP15.45■□□□□ 0.06
SPG7-218ENST00000568205 KCNJ13O60928 360 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 NIPSNAP2O75323 286 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 CELA2BP08218 269 aaPredicted RBP15.45■□□□□ 0.06
SPG7-218ENST00000568205 GSTM1P09488 218 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 VCLP18206 1134 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 DGKAP23743 735 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 PBLDP30039 288 aaPredicted RBP15.45■□□□□ 0.06
SPG7-218ENST00000568205 ARHGAP8P85298 464 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 GSTM4Q03013 218 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 ILF2Q12905 390 aaKnown RBP15.45■□□□□ 0.06
SPG7-218ENST00000568205 BNIP3Q12983 259 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 ELOCQ15369 112 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 NRROSQ86YC3 692 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 KRT222Q8N1A0 295 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 OR2L2Q8NH16 312 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 CCL4L1Q8NHW4 92 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 HM13Q8TCT9 377 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 GPBAR1Q8TDU6 330 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 MRRFQ96E11 262 aaKnown RBP15.45■□□□□ 0.06
SPG7-218ENST00000568205 ATXN7L3BQ96GX2 97 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 PANX3Q96QZ0 392 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 NDNQ99608 321 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 RBBP8Q99708 897 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 CCM2Q9BSQ5 444 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 AARSD1Q9BTE6 412 aaKnown RBP15.45■□□□□ 0.06
SPG7-218ENST00000568205 EDEM2Q9BV94 578 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 TSSK1BQ9BXA7 367 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 GSDMCQ9BYG8 508 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 KLC4Q9NSK0 619 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 UCKL1Q9NWZ5 548 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 KCNK6Q9Y257 313 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 ST14Q9Y5Y6 855 aa15.45■□□□□ 0.06
SPG7-218ENST00000568205 GVINP1Q7Z2Y8 2422 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 C17orf113A0A1B0GUU1 675 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 PRR19A6NJB7 356 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 LMO7DNF2Z398 122 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 FAM155BO75949 473 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 TRIM16O95361 564 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 ZNF883P0CG24 379 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 ITGB6P18564 788 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 AK4P27144 223 aaPredicted RBP15.44■□□□□ 0.06
SPG7-218ENST00000568205 SPRP35270 261 aaPredicted RBP15.44■□□□□ 0.06
SPG7-218ENST00000568205 ACTR1BP42025 376 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 ACTR1AP61163 376 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 DMPKQ09013 629 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 AASDHQ4L235 1098 aaPredicted RBP15.44■□□□□ 0.06
SPG7-218ENST00000568205 ZNF658BQ4V348 819 aaPredicted RBP15.44■□□□□ 0.06
SPG7-218ENST00000568205 RBM20Q5T481 1227 aaKnown RBP15.44■□□□□ 0.06
SPG7-218ENST00000568205 GRTP1Q5TC63 336 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 KANSL1Q7Z3B3 1105 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 TAF8Q7Z7C8 310 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 GPATCH11Q8N954 259 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 SAP25Q8TEE9 199 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 SLC44A1Q8WWI5 657 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 KCNJ9Q92806 393 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 VPS39Q96JC1 886 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 PAFAH2Q99487 392 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 CCDC77Q9BR77 488 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 TMEM9BQ9NQ34 198 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 DNAAF2Q9NVR5 837 aaKnown RBP15.44■□□□□ 0.06
SPG7-218ENST00000568205 GULP1Q9UBP9 304 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 FAM8A1Q9UBU6 413 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 DNAJC16Q9Y2G8 782 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 MED16Q9Y2X0 877 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 CSNK1G3Q9Y6M4 447 aa15.44■□□□□ 0.06
SPG7-218ENST00000568205 PI4KAP42356 2102 aa15.43■□□□□ 0.06
SPG7-218ENST00000568205 FAM95CA0A1B0GW59 222 aa15.43■□□□□ 0.06
SPG7-218ENST00000568205 E5RI56 91 aa15.43■□□□□ 0.06
SPG7-218ENST00000568205 POC1B-GALNT4F8VUJ3 575 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms