RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 RGPD2P0DJD1 1756 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 HTTP42858 3142 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 CTAGE9A4FU28 777 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 SMIM1B2RUZ4 78 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 IRAK2O43187 625 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 TSPAN3O60637 253 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 CD48P09326 243 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 CTAGE8P0CG41 777 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 PAX1P15863 534 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 RRM1P23921 792 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 KRTAP5-9P26371 169 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 CHRNB4P30926 498 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 GRK6P43250 576 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 ARL4CP56559 192 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 HUNKP57058 714 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 GNB1P62873 340 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 RPL24P83731 157 aaKnown RBP2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 ZNF766Q5HY98 468 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 WDR38Q5JTN6 314 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 FBXO47Q5MNV8 452 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 ZC2HC1BQ5TFG8 222 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 TXNDC8Q6A555 127 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 SLC27A1Q6PCB7 646 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 Q7L0L9 218 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 CPOQ8IVL8 374 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 CTAGE4Q8IX94 777 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 STPG4Q8N801 248 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 CNBD1Q8NA66 436 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 C11orf65Q8NCR3 313 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 ADAD2Q8NCV1 583 aaKnown RBP2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 MAPK1IP1LQ8NDC0 245 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 CADM4Q8NFZ8 388 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 FCAMRQ8WWV6 532 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 LINGO1Q96FE5 620 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 C17orf77Q96MU5 243 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 PYM1Q9BRP8 204 aaKnown RBP2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 PLEKHA4Q9H4M7 779 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 SLC52A3Q9NQ40 469 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 PCDHGB3Q9Y5G1 929 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 ZFYVE26Q68DK2 2539 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 NUP155O75694 1391 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 PALLDQ8WX93 1383 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 VPS8Q8N3P4 1428 aa2.33□□□□□ -2.04
SUB1P3-201ENST00000564581 TEP1Q99973 2627 aaKnown RBP2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 COL5A3P25940 1745 aaPredicted RBP2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 TEX13CA0A0J9YWL9 993 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 CCDC194A0A1B0GVG4 234 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 GOLGA6L9A6NEM1 432 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 BLOC1S5-TXNDC5H3BN57 136 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 ZNHIT1O43257 154 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 SEC14L5O43304 696 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 CIDEAO60543 219 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 MLYCDO95822 493 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 EGFP01133 1207 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 KRT2P35908 639 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 GGT5P36269 586 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 PGM1P36871 562 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 AMPHP49418 695 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 HOXA1P49639 335 aaPredicted RBP2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 CCR5P51681 352 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 UFM1P61960 85 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 RUNX1T1Q06455 604 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 ZNF234Q14588 700 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 KRT72Q14CN4 511 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 LPAL2Q16609 132 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 HIST2H2ACQ16777 129 aaPredicted RBP2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 KRT24Q2M2I5 525 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 COL28A1Q2UY09 1125 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 TMEM31Q5JXX7 168 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 MAP3K21Q5TCX8 1036 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 SFMBT2Q5VUG0 894 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 GGNBP1Q5YKI7 109 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 FAM53AQ6NSI3 398 aaPredicted RBP2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 METTL2BQ6P1Q9 378 aaKnown RBP2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 ADSSL1Q8N142 457 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 BEST3Q8N1M1 668 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 SAMD3Q8N6K7 520 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 SLC38A5Q8WUX1 472 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 STAMBPL1Q96FJ0 436 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 METTL2AQ96IZ6 378 aaKnown RBP2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 KLHL15Q96M94 604 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 GUCD1Q96NT3 240 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 PCGF6Q9BYE7 350 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 INTS2Q9H0H0 1204 aaKnown RBP2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 TFB2MQ9H5Q4 396 aaKnown RBP2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 MAP3K20Q9NYL2 800 aaKnown RBP2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 KLHL20Q9Y2M5 609 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 SMAD5-AS1Q9Y6J3 95 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 CEPT1Q9Y6K0 416 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 WDR87Q6ZQQ6 2873 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 PTPRCP08575 1304 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 MAP3K19Q56UN5 1328 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 MGAMO43451 1857 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 CREBBPQ92793 2442 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 CFAP47Q6ZTR5 3102 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 CPSF1Q10570 1443 aaKnown RBP2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 USP24Q9UPU5 2620 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 ZNF292O60281 2723 aa2.32□□□□□ -2.04
SUB1P3-201ENST00000564581 MON2Q7Z3U7 1717 aa2.31□□□□□ -2.04
SUB1P3-201ENST00000564581 ANKRD26Q9UPS8 1709 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms