RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ZBTB43O43298 467 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 DAB1O75553 588 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 CLPTM1O96005 669 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 PLA2G4BP0C869 781 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 ATP1A3P13637 1013 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 ANXA7P20073 488 aaKnown RBP2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 ZNF10P21506 573 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 ITGA3P26006 1051 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 BSGP35613 385 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 KRT2P35908 639 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 GOLGA8DPQ0D2H9 430 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 UBE2V1Q13404 147 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 MVPQ14764 893 aaKnown RBP2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 TBCEQ15813 527 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 TMEM95Q3KNT9 176 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 BHLHB9Q6PI77 547 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 TSPAN33Q86UF1 283 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 SMAP1Q8IYB5 467 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 DIS3L2Q8IYB7 885 aaKnown RBP2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 FRMD1Q8N878 549 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 GSDMBQ8TAX9 411 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 ETNPPLQ8TBG4 499 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 SEMA4DQ92854 862 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 SLC47A1Q96FL8 570 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 ZNF71Q9NQZ8 489 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 MBNL1Q9NR56 388 aaKnown RBP2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 ZDHHC18Q9NUE0 388 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 BARHL2Q9NY43 387 aa2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 LIMA1Q9UHB6 759 aaKnown RBP2.97□□□□□ -1.93
HMGB1P33-201ENST00000563485 MEIOCA2RUB1 952 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 J3QR06 171 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 PLK4O00444 970 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 SMAD9O15198 467 aaKnown RBP2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 GPR137BO60478 399 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 NGFP01138 241 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 TPOP07202 933 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 CKMT2P17540 419 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 CBLP22681 906 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 ACADLP28330 430 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 PIK3CAP42336 1068 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 CCR9P51686 369 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 THOP1P52888 689 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 GALCP54803 685 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 NIPAL4Q0D2K0 466 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 MFAP5Q13361 173 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 GTDC1Q4AE62 458 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 ADAMTSL4-AS1Q5T5F5 129 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 ZNF534Q76KX8 674 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 ISCA2Q86U28 154 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 PLD3Q8IV08 490 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 CEP97Q8IW35 865 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 ARHGAP12Q8IWW6 846 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 HJURPQ8NCD3 748 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 TRPC4APQ8TEL6 797 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 PRAC1Q96KF2 57 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 DCTN5Q9BTE1 182 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 TRIM15Q9C019 465 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 RRP7BPQ9NSQ0 103 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 ECHDC1Q9NTX5 307 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 ATAD3AQ9NVI7 634 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 TSPYL4Q9UJ04 414 aa2.96□□□□□ -1.94
HMGB1P33-201ENST00000563485 OR6C76A6NM76 312 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 TRMUO75648 421 aaKnown RBP2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 SORBS2O94875 1100 aaKnown RBP2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 CSPG5O95196 566 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 EML2O95834 649 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 CLEC3BP05452 202 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 DPEP1P16444 411 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 SP100P23497 879 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 WNT5AP41221 380 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 MSH2P43246 934 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 GPR143P51810 404 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 DSCR10P59022 87 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 KCNJ10P78508 379 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 TFAP4Q01664 338 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 LRMPQ12912 555 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 MED22Q15528 200 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 ARHGEF16Q5VV41 709 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 ALS2CLQ60I27 953 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 TMEM198Q66K66 360 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 PWWP2BQ6NUJ5 590 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 GLDNQ6ZMI3 551 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 DENND5BQ6ZUT9 1274 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 FASTKD5Q7L8L6 764 aaKnown RBP2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 GALNT13Q8IUC8 556 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 ZNF440Q8IYI8 595 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 CRYBG2Q8N1P7 616 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 PPHLN1Q8NEY8 458 aaKnown RBP2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 OR2T6Q8NHC8 308 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 TMEM143Q96AN5 459 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 GMPPAQ96IJ6 420 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 C1orf74Q96LT6 269 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 VGLL1Q99990 258 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 UBXN6Q9BZV1 441 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 PDCL3Q9H2J4 239 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 JMJD4Q9H9V9 463 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 MIOSQ9NXC5 875 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 TRMT1Q9NXH9 659 aaKnown RBP2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 COQ3Q9NZJ6 369 aa2.95□□□□□ -1.94
HMGB1P33-201ENST00000563485 KLHL8Q9P2G9 620 aaPredicted RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms