RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 TMEM184BQ9Y519 407 aaPredicted RBP3.42□□□□□ -1.86
CTDSPL2-211ENST00000561189 YIPF1Q9Y548 306 aa3.42□□□□□ -1.86
CTDSPL2-211ENST00000561189 A0A0G2JPF8 293 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 MED19A0JLT2 244 aaPredicted RBP3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 HNRNPCL3B7ZW38 293 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 PROB1E7EW31 1015 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 MEIS2O14770 477 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 ZNF217O75362 1048 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 H1F0P07305 194 aaKnown RBP3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 LINGO3P0C6S8 592 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 HNRNPCL4P0DMR1 293 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 MYL6BP14649 208 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 ZNF23P17027 643 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 TCEA1P23193 301 aaKnown RBP3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 DNASE1P24855 282 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 HRH2P25021 359 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 CCKBRP32239 447 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 CTNNA1P35221 906 aaKnown RBP3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 APOBEC1P41238 236 aaKnown RBP3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 PSMC4P43686 418 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 ZNF41P51814 821 aaPredicted RBP3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 CLDN20P56880 219 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 RPS18P62269 152 aaKnown RBP3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 COG7P83436 770 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 CDK3Q00526 305 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 IL11RAQ14626 422 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 LEXMQ3ZCV2 418 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 KRTCAP3Q53RY4 240 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 KRBOX4Q5JUW0 171 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 PAPPA-AS1Q5QFB9 102 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 FAM69BQ5VUD6 431 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 ALS2CLQ60I27 953 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 RHBDF2Q6PJF5 856 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 CENPVQ7Z7K6 275 aaPredicted RBP3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 ANKRD23Q86SG2 305 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 PGBD5Q8N414 524 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 IQUBQ8NA54 791 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 SLC38A9Q8NBW4 561 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 RBM15BQ8NDT2 890 aaKnown RBP3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 OR2AK2Q8NG84 335 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 OR10S1Q8NGN2 331 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 KIF18AQ8NI77 898 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 WDR20Q8TBZ3 569 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 PHF21AQ96BD5 680 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 PHF21BQ96EK2 531 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 FAM81BQ96LP2 452 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 EGFL8Q99944 293 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 CITED2Q99967 270 aaPredicted RBP3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 SEMA6AQ9H2E6 1030 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 NOL11Q9H8H0 719 aaKnown RBP3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 UBTD1Q9HAC8 227 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 TCP11L1Q9NUJ3 509 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 CPSF3Q9UKF6 684 aaKnown RBP3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 B3GALT5Q9Y2C3 310 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 TNFRSF18Q9Y5U5 241 aa3.41□□□□□ -1.86
CTDSPL2-211ENST00000561189 ARHGEF40Q8TER5 1519 aa3.4□□□□□ -1.86
CTDSPL2-211ENST00000561189 IGLV5-52A0A0A0MRZ9 124 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 A0A1W2PR77 199 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 DENND3A2RUS2 1198 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 OR5K3A6NET4 321 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 ZNHIT1O43257 154 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 WDR1O75083 606 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 TBX10O75333 385 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 PSMD10O75832 226 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 KDM4BO94953 1096 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 CLDN14O95500 239 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 CAVIN2O95810 425 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 KRT19P08727 400 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 ACAA1P09110 424 aaPredicted RBP3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 SNHG28P0DPA3 235 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 TUBA1BP68363 451 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 SCN1BQ07699 218 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 TFCP2Q12800 502 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 ZNF155Q12901 538 aaPredicted RBP3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 SNTA1Q13424 505 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 ZNF234Q14588 700 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 MELKQ14680 651 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 PTPRCAPQ14761 206 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 ZNF628Q5EBL2 1059 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 GCNT6Q5T4J0 391 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 ERN2Q76MJ5 926 aaKnown RBP3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 PLPPR4Q7Z2D5 763 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 GALNTL5Q7Z4T8 443 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 CEP57Q86XR8 500 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 KMT5CQ86Y97 462 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 FOXRED2Q8IWF2 684 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 ZBTB8BQ8NAP8 495 aaPredicted RBP3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 CAMKVQ8NCB2 501 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 CFAP61Q8NHU2 1237 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 HMGCLL1Q8TB92 370 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 MIB2Q96AX9 1013 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 NXNL1Q96CM4 212 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 PRMT6Q96LA8 375 aaPredicted RBP3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 DUX5Q96PT3 197 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 OR6C1Q96RD1 312 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 ADPGKQ9BRR6 497 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 SYT17Q9BSW7 474 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 SLC25A23Q9BV35 468 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 WNT5BQ9H1J7 359 aa3.4□□□□□ -1.87
CTDSPL2-211ENST00000561189 KCNN2Q9H2S1 579 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms