RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 NKX2-2O95096 273 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 STARD3NLO95772 234 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 CYC1P08574 325 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 KRT10P13645 584 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 ACTN2P35609 894 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 EIF2DP41214 584 aaKnown RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 CD86P42081 329 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 MSH2P43246 934 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 ENTPD1P49961 510 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 ALDH3A2P51648 485 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 SUOXP51687 545 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 LTBQ06643 244 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 KCNC3Q14003 757 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 TRIM29Q14134 588 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 SMUG1Q53HV7 270 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 KCNT1Q5JUK3 1230 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 TATDN1Q6P1N9 297 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 FBXO46Q6PJ61 603 aaPredicted RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF704Q6ZNC4 412 aaPredicted RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 INTS8Q75QN2 995 aaKnown RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 CEP57Q86XR8 500 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 PALB2Q86YC2 1186 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 OR14A16Q8NHC5 309 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 BICD1Q96G01 975 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 RBM18Q96H35 190 aaKnown RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 ERO1AQ96HE7 468 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 EGFL8Q99944 293 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 NTPCRQ9BSD7 190 aaKnown RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 RTN4RQ9BZR6 473 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 OR10A4Q9H209 315 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 FOXP1Q9H334 677 aaPredicted RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 PLK3Q9H4B4 646 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 MRPL15Q9P015 296 aaKnown RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 CLIP2Q9UDT6 1046 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 STK39Q9UEW8 545 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 CDC14AQ9UNH5 594 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 KNSTRNQ9Y448 316 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 TIMM22Q9Y584 194 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 DDX49Q9Y6V7 483 aaKnown RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 A0A1W2PPQ1 181 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 SRRM3A6NNA2 597 aaPredicted RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 ITM2AO43736 263 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 TBX10O75333 385 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF217O75362 1048 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 GJB3O75712 270 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 PMS2P2O95744 297 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 CH25HO95992 272 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 SCG2P13521 617 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 RPL3P39023 403 aaKnown RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 THBS3P49746 956 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 PEX5P50542 639 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 STAT2P52630 851 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 RRP1P56182 461 aaKnown RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 CLDN20P56880 219 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 NUCB1Q02818 461 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 DLG1Q12959 904 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 MMEL1Q495T6 779 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 CCDC158Q5M9N0 1113 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 ARMC4Q5T2S8 1044 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 ADALQ6DHV7 355 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 PRR27Q6MZM9 219 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 CES5AQ6NT32 575 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 SLC30A6Q6NXT4 461 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 CHST3Q7LGC8 479 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 CTU1Q7Z7A3 348 aaKnown RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 HSCBQ8IWL3 235 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 SLC7A5P1Q8MH63 180 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 TAGAPQ8N103 731 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 PPFIBP2Q8ND30 876 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 KCNG4Q8TDN1 519 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 PIGTQ969N2 578 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 QRFPRQ96P65 431 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 NUDCD1Q96RS6 583 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 TMEM204Q9BSN7 226 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 LHPPQ9H008 270 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 TMX4Q9H1E5 349 aaPredicted RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 NDST4Q9H3R1 872 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 EBF3Q9H4W6 596 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 NFKBIL1Q9UBC1 381 aaPredicted RBP1.68□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF148Q9UQR1 794 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 AMDHD2Q9Y303 409 aa1.68□□□□□ -2.14
HIF1A-212ENST00000557538 SOS1Q07889 1333 aaPredicted RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 FEZF1A0PJY2 475 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 MYMKA6NI61 221 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 H0YGN5 161 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 CTDSP2O14595 271 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 TIMM23O14925 209 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 ANKRD28O15084 1053 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 MID1O15344 667 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 KCNJ13O60928 360 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 RNASEH1O60930 286 aaKnown RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 TOMM70O94826 608 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 TUBBP07437 444 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF131P52739 623 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 MRPL12P52815 198 aaKnown RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 HSD17B7P56937 341 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 EEF1A1P68104 462 aaKnown RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 HMGN5P82970 282 aaKnown RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 SORDQ00796 357 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms