RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 SPNS2Q8IVW8 549 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 KRT222Q8N1A0 295 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 ACVR1CQ8NER5 493 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 HNRNPLLQ8WVV9 542 aaKnown RBP17.14■□□□□ 0.33
TUBB3-211ENST00000556536 OR2M4Q96R27 311 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 ELF4Q99607 663 aaPredicted RBP17.14■□□□□ 0.33
TUBB3-211ENST00000556536 NDNQ99608 321 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 CPNE1Q99829 537 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 NUSAP1Q9BXS6 441 aaKnown RBP17.14■□□□□ 0.33
TUBB3-211ENST00000556536 TMEM168Q9H0V1 697 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 IL21RQ9HBE5 538 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 GNPTGQ9UJJ9 305 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 GPR34Q9UPC5 381 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 ST14Q9Y5Y6 855 aa17.14■□□□□ 0.33
TUBB3-211ENST00000556536 SPAG17Q6Q759 2223 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 EXOC1LA0A1B0GW35 172 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 DCDC2BA2VCK2 349 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 POC1B-GALNT4F8VUJ3 575 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 KMOO15229 486 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 NIPSNAP2O75323 286 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 ESR1P03372 595 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 CELA2BP08218 269 aaPredicted RBP17.13■□□□□ 0.33
TUBB3-211ENST00000556536 ADRB1P08588 477 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 OR56A5P0C7T3 313 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 ZNF806P0C7X5 589 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 ACP5P13686 325 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 H2AFXP16104 143 aaPredicted RBP17.13■□□□□ 0.33
TUBB3-211ENST00000556536 ENGP17813 658 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 GCAP28676 217 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 PBLDP30039 288 aaPredicted RBP17.13■□□□□ 0.33
TUBB3-211ENST00000556536 GP5P40197 560 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 CSE1LP55060 971 aaKnown RBP17.13■□□□□ 0.33
TUBB3-211ENST00000556536 SPEM2Q0P670 501 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 ST3GAL2Q16842 350 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 CHST15Q7LFX5 561 aaPredicted RBP17.13■□□□□ 0.33
TUBB3-211ENST00000556536 OR2W6PQ8NHA6 318 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 CCL4L1Q8NHW4 92 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 SLC44A1Q8WWI5 657 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 FAM136AQ96C01 138 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 ZNF514Q96K75 400 aaPredicted RBP17.13■□□□□ 0.33
TUBB3-211ENST00000556536 PAFAH2Q99487 392 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 AARSD1Q9BTE6 412 aaKnown RBP17.13■□□□□ 0.33
TUBB3-211ENST00000556536 GTPBP2Q9BX10 602 aaKnown RBP17.13■□□□□ 0.33
TUBB3-211ENST00000556536 SLC13A1Q9BZW2 595 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 RHOJQ9H4E5 214 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 PARD6AQ9NPB6 346 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 TXNDC16Q9P2K2 825 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 GALPQ9UBC7 116 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 APOBEC3BQ9UH17 382 aaKnown RBP17.13■□□□□ 0.33
TUBB3-211ENST00000556536 MED16Q9Y2X0 877 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 PCDHB1Q9Y5F3 818 aa17.13■□□□□ 0.33
TUBB3-211ENST00000556536 CFAP47Q6ZTR5 3102 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 SDC3O75056 442 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 TRIM16O95361 564 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 SYPP08247 313 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 TGM1P22735 817 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 MSH2P43246 934 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 RXRGP48443 463 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 CDKN2DP55273 166 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 TIAL1Q01085 375 aaKnown RBP eCLIP17.12■□□□□ 0.33
TUBB3-211ENST00000556536 IL9RQ01113 521 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 CTBSQ01459 385 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 BNIP3Q12983 259 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 C1orf61Q13536 156 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 ZNF658BQ4V348 819 aaPredicted RBP17.12■□□□□ 0.33
TUBB3-211ENST00000556536 GRTP1Q5TC63 336 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 XKR5Q6UX68 686 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 NAPRTQ6XQN6 538 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 NRROSQ86YC3 692 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 GPATCH11Q8N954 259 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 DCAKDQ8WVC6 231 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 LINC00615Q96LM1 132 aaPredicted RBP17.12■□□□□ 0.33
TUBB3-211ENST00000556536 RBBP8Q99708 897 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 CCM2Q9BSQ5 444 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 DHRS4Q9BTZ2 278 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 LRRC61Q9BV99 259 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 ZDHHC5Q9C0B5 715 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 GAREM1Q9H706 876 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 TRNAU1APQ9NX07 287 aaKnown RBP17.12■□□□□ 0.33
TUBB3-211ENST00000556536 GULP1Q9UBP9 304 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 FAM8A1Q9UBU6 413 aa17.12■□□□□ 0.33
TUBB3-211ENST00000556536 MTO1Q9Y2Z2 717 aaKnown RBP17.12■□□□□ 0.33
TUBB3-211ENST00000556536 A0A1B0GTQ1 180 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 LNP1A1A4G5 178 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 QSOX1O00391 747 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 NUDT17P0C025 328 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 AK4P27144 223 aaPredicted RBP17.11■□□□□ 0.33
TUBB3-211ENST00000556536 CCR7P32248 378 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 BLKP51451 505 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 PGGT1BP53609 377 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 LIMK2P53671 638 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 HNRNPKP61978 463 aaKnown RBP eCLIP17.11■□□□□ 0.33
TUBB3-211ENST00000556536 INSCQ1MX18 579 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 PRRT3Q5FWE3 981 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 HECTD2Q5U5R9 776 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 FBXO38Q6PIJ6 1188 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 IL27RAQ6UWB1 636 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 FAM83HQ6ZRV2 1179 aaPredicted RBP17.11■□□□□ 0.33
TUBB3-211ENST00000556536 OXR1Q8N573 874 aa17.11■□□□□ 0.33
TUBB3-211ENST00000556536 LILRA3Q8N6C8 439 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms