RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 SNX2O60749 519 aa23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 VAPBO95292 243 aa23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 EML2O95834 649 aa23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 GPR3P46089 330 aa23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 RPL21P46778 160 aaKnown RBP23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 ARCN1P48444 511 aaKnown RBP23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 MAZP56270 477 aaKnown RBP23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 INSM1Q01101 510 aaPredicted RBP23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 METRNLQ641Q3 311 aa23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 SLC9B2Q86UD5 537 aa23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 CCNJLQ8IV13 435 aa23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 AGGF1Q8N302 714 aaeCLIP23.8■■□□□ 1.42e-17■□□□□ 8.1
SDR39U1-209ENST00000554947 MNS1Q8NEH6 495 aa23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 GPR150Q8NGU9 434 aa23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 HM13Q8TCT9 377 aa23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 SLC37A2Q8TED4 501 aa23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 PATE1Q8WXA2 126 aa23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 LRRC39Q96DD0 335 aa23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 CCDC97Q96F63 343 aaPredicted RBP23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 STAMBPL1Q96FJ0 436 aa23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 RAB17Q9H0T7 212 aa23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 ABCG4Q9H172 646 aa23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 STN1Q9H668 368 aaKnown RBP23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 SARS2Q9NP81 518 aaKnown RBP23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 PRDM8Q9NQV8 689 aa23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 ACSL5Q9ULC5 683 aa23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 UTP11Q9Y3A2 253 aaKnown RBP23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 NEUROG3Q9Y4Z2 214 aa23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 RPS6KL1Q9Y6S9 549 aa23.8■■□□□ 1.4
SDR39U1-209ENST00000554947 SPEGQ15772 3267 aa23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 COL27A1Q8IZC6 1860 aaPredicted RBP23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 RHPN2P1A8MT19 583 aa23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 TP73O15350 636 aa23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 HYAL3O43820 417 aaPredicted RBP23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 TCEA3O75764 348 aa23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 TTC4O95801 387 aa23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 XRCC1P18887 633 aaPredicted RBP23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 CDCP2Q5VXM1 449 aa23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 DUPD1Q68J44 220 aa23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 MRNIPQ6NTE8 343 aa23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 CES3Q6UWW8 571 aa23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 MICALCLQ6ZW33 695 aa23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 BEND7Q8N7W2 519 aaPredicted RBP23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 SH3KBP1Q96B97 665 aa23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 ZNF669Q96BR6 464 aaPredicted RBP23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 TCF12Q99081 682 aa23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 CCM2Q9BSQ5 444 aa23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 TRIM31Q9BZY9 425 aa23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 ANGPTL2Q9UKU9 493 aa23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 MAD1L1Q9Y6D9 718 aa23.79■■□□□ 1.4
SDR39U1-209ENST00000554947 ZCWPW2A0A1B0GU75 182 aa23.78■■□□□ 1.4
SDR39U1-209ENST00000554947 PFDN6O15212 129 aa23.78■■□□□ 1.4
SDR39U1-209ENST00000554947 POLBP06746 335 aa23.78■■□□□ 1.4
SDR39U1-209ENST00000554947 PGAM1P18669 254 aa23.78■■□□□ 1.4
SDR39U1-209ENST00000554947 ARL4CP56559 192 aa23.78■■□□□ 1.4
SDR39U1-209ENST00000554947 DHX9Q08211 1270 aaKnown RBP23.78■■□□□ 1.4
SDR39U1-209ENST00000554947 CALCOCO2Q13137 446 aa23.78■■□□□ 1.4
SDR39U1-209ENST00000554947 BIRC2Q13490 618 aa23.78■■□□□ 1.4
SDR39U1-209ENST00000554947 SEMA3AQ14563 771 aa23.78■■□□□ 1.4
SDR39U1-209ENST00000554947 HES3Q5TGS1 186 aa23.78■■□□□ 1.4
SDR39U1-209ENST00000554947 SDCCAG8Q86SQ7 713 aaPredicted RBP23.78■■□□□ 1.4
SDR39U1-209ENST00000554947 LMNTD2Q8IXW0 634 aa23.78■■□□□ 1.4
SDR39U1-209ENST00000554947 FCRL3Q96P31 734 aaPredicted RBP23.78■■□□□ 1.4
SDR39U1-209ENST00000554947 EBNA1BP2Q99848 306 aaKnown RBP23.78■■□□□ 1.4
SDR39U1-209ENST00000554947 SCNM1Q9BWG6 230 aa23.78■■□□□ 1.4
SDR39U1-209ENST00000554947 MARCH4Q9P2E8 410 aaPredicted RBP23.78■■□□□ 1.4
SDR39U1-209ENST00000554947 RABGEF1Q9UJ41 708 aa23.78■■□□□ 1.4
SDR39U1-209ENST00000554947 SNX24Q9Y343 169 aa23.78■■□□□ 1.4
SDR39U1-209ENST00000554947 FAM169AQ9Y6X4 670 aa23.78■■□□□ 1.4
SDR39U1-209ENST00000554947 PDZK1P1A8MUH7 402 aa23.77■■□□□ 1.4
SDR39U1-209ENST00000554947 NTN3O00634 580 aaPredicted RBP23.77■■□□□ 1.4
SDR39U1-209ENST00000554947 FTH1P02794 183 aa23.77■■□□□ 1.4
SDR39U1-209ENST00000554947 OR56A5P0C7T3 313 aa23.77■■□□□ 1.4
SDR39U1-209ENST00000554947 OGNP20774 298 aaKnown RBP23.77■■□□□ 1.4
SDR39U1-209ENST00000554947 UBE2IP63279 158 aaKnown RBP23.77■■□□□ 1.4
SDR39U1-209ENST00000554947 NFE2L1Q14494 772 aa23.77■■□□□ 1.4
SDR39U1-209ENST00000554947 HIF1AQ16665 826 aa23.77■■□□□ 1.4
SDR39U1-209ENST00000554947 CLPPQ16740 277 aaPredicted RBP23.77■■□□□ 1.4
SDR39U1-209ENST00000554947 TYSND1Q2T9J0 566 aa23.77■■□□□ 1.4
SDR39U1-209ENST00000554947 ZNF658BQ4V348 819 aaPredicted RBP23.77■■□□□ 1.4
SDR39U1-209ENST00000554947 RNF187Q5TA31 235 aaPredicted RBP23.77■■□□□ 1.4
SDR39U1-209ENST00000554947 SPRED1Q7Z699 444 aa23.77■■□□□ 1.4
SDR39U1-209ENST00000554947 LRRC6Q86X45 466 aa23.77■■□□□ 1.4
SDR39U1-209ENST00000554947 CLDN19Q8N6F1 224 aa23.77■■□□□ 1.4
SDR39U1-209ENST00000554947 UCK1Q9HA47 277 aa23.77■■□□□ 1.4
SDR39U1-209ENST00000554947 CPNE7Q9UBL6 633 aa23.77■■□□□ 1.4
SDR39U1-209ENST00000554947 PRMT5O14744 637 aaPredicted RBP23.76■■□□□ 1.39
SDR39U1-209ENST00000554947 PPM1DO15297 605 aa23.76■■□□□ 1.39
SDR39U1-209ENST00000554947 BRAFP15056 766 aa23.76■■□□□ 1.39
SDR39U1-209ENST00000554947 RPS3P23396 243 aaKnown RBP eCLIP23.76■■□□□ 1.39
SDR39U1-209ENST00000554947 PBLDP30039 288 aaPredicted RBP23.76■■□□□ 1.39
SDR39U1-209ENST00000554947 HALP42357 657 aa23.76■■□□□ 1.39
SDR39U1-209ENST00000554947 DRG2P55039 364 aaKnown RBP23.76■■□□□ 1.39
SDR39U1-209ENST00000554947 HHEXQ03014 270 aa23.76■■□□□ 1.39
SDR39U1-209ENST00000554947 RPA4Q13156 261 aa23.76■■□□□ 1.39
SDR39U1-209ENST00000554947 LONRF1Q17RB8 773 aa23.76■■□□□ 1.39
SDR39U1-209ENST00000554947 BBS9Q3SYG4 887 aa23.76■■□□□ 1.39
SDR39U1-209ENST00000554947 MSS51Q4VC12 460 aa23.76■■□□□ 1.39
SDR39U1-209ENST00000554947 NEPROQ6NW34 567 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms