RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 GPR63Q9BZJ6 419 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 ACSS2Q9NR19 701 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 FGF21Q9NSA1 209 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 SHOC2Q9UQ13 582 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 DNAJC16Q9Y2G8 782 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 WDR37Q9Y2I8 494 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 ZNF451Q9Y4E5 1061 aa9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 DNMT3AQ9Y6K1 912 aaPredicted RBP9.65□□□□□ -0.86
TRAFD1-207ENST00000550051 RCCD1A6NED2 376 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 ENO4A6NNW6 628 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 SMTNL1A8MU46 457 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 TCP11X1B4DZS4 312 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 KCNK1O00180 336 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 MTX2O75431 263 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 RAB40ALP0C0E4 278 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 HALP42357 657 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 SSR1P43307 286 aaKnown RBP9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 DRG2P55039 364 aaKnown RBP9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 CDK18Q07002 472 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 GALNT3Q14435 633 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 KCNAB1Q14722 419 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 CHRNA6Q15825 494 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 SEPT7Q16181 437 aaKnown RBP9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 PLA2G4EQ3MJ16 856 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 JMJD6Q6NYC1 403 aaPredicted RBP9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 NT5DC3Q86UY8 548 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 AMZ2Q86W34 360 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 ADAMTS17Q8TE56 1095 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 LRRN4Q8WUT4 740 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 NAP1L5Q96NT1 182 aaPredicted RBP9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 RNF157Q96PX1 679 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 RUFY1Q96T51 708 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 MAP3K3Q99759 626 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 BPIFA3Q9BQP9 254 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 NAT10Q9H0A0 1025 aaKnown RBP9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 SLC25A51Q9H1U9 297 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 LATS2Q9NRM7 1088 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 KCND1Q9NSA2 647 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 ZNF711Q9Y462 761 aa9.64□□□□□ -0.87
TRAFD1-207ENST00000550051 ITPR2Q14571 2701 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 A0A087X0T9 212 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 A0A1B0GTH6 734 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 SSU72P8A0A1W2PR75 194 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 TLCD2A6NGC4 264 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 ZNF487B1APH4 448 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 DPM1O60762 260 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 POP7O75817 140 aaKnown RBP9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 PROSCO94903 275 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 NDST3O95803 873 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 SERPING1P05155 500 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 KLK3P07288 261 aaPredicted RBP9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 PIRTP0C851 137 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 FAM228BP0C875 321 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 EBLN1P0CF75 366 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 RNF224P0DH78 156 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 KDELR1P24390 212 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 HMGCLP35914 325 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 PPP1CAP62136 330 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 RPS18P62269 152 aaKnown RBP9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 TUBB4BP68371 445 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 ZBTB17Q13105 803 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 IL10RAQ13651 578 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 TUBB2AQ13885 445 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 RPE65Q16518 533 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 EIF2S3LQ2VIR3 472 aaKnown RBP9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 ATP13A5Q4VNC0 1218 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 METRNLQ641Q3 311 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 CPZQ66K79 652 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 CCDC70Q6NSX1 233 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 PACS2Q86VP3 889 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 Q8NA96 180 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 GLIS1Q8NBF1 620 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 SLC38A9Q8NBW4 561 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 ZNF501Q96CX3 271 aaPredicted RBP9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 TTC25Q96NG3 672 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 TUBB2BQ9BVA1 445 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 IL26Q9NPH9 171 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 TRIM10Q9UDY6 481 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 LCMT1Q9UIC8 334 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 GTF3C3Q9Y5Q9 886 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 CREBBPQ92793 2442 aa9.63□□□□□ -0.87
TRAFD1-207ENST00000550051 MYO9AB2RTY4 2548 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 HIVEP3Q5T1R4 2406 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 LOC285095A0A1B0GVY8 99 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 A0A1W2PQJ5 194 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 OR5K3A6NET4 321 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 ARGFXA6NJG6 315 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 MEN1O00255 615 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 AURKAO14965 403 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 CPNE3O75131 537 aaKnown RBP9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 SCRG1O75711 98 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 ZBTB11O95625 1053 aaPredicted RBP9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 EPOP01588 193 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 MSL3P1P0C860 447 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 PTGIRP43119 386 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 ARL4DP49703 201 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 GSDMDP57764 484 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 TAS2R40P59535 323 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 CHAF1BQ13112 559 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms