RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 VLDLRP98155 873 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 KHDC1Q4VXA5 237 aaKnown RBP15.29■□□□□ 0.04
CHD4-210ENST00000544040 DGLUCYQ7Z3D6 616 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 RRAGCQ9HB90 399 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 ALKBH4Q9NXW9 302 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 MYCLP1P12525 358 aaPredicted RBP15.29■□□□□ 0.04
CHD4-210ENST00000544040 BMP6P22004 513 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 PHC1P78364 1004 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 ARL13AQ5H913 290 aaPredicted RBP15.29■□□□□ 0.04
CHD4-210ENST00000544040 OGFRL1Q5TC84 451 aaPredicted RBP15.29■□□□□ 0.04
CHD4-210ENST00000544040 ADGRG6Q86SQ4 1221 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 PIGXQ8TBF5 258 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 CTPS2Q9NRF8 586 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 UPB1Q9UBR1 384 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 ZNF639Q9UID6 485 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 CLDN25C9JDP6 229 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 H3BM21 787 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 PLOD2O00469 737 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 NME6O75414 186 aaPredicted RBP15.29■□□□□ 0.04
CHD4-210ENST00000544040 RPLP0P05388 317 aaKnown RBP15.29■□□□□ 0.04
CHD4-210ENST00000544040 RB1P06400 928 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 C4orf46Q504U0 113 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 IRF2BP2Q7Z5L9 587 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 TRIM43Q96BQ3 446 aaPredicted RBP15.29■□□□□ 0.04
CHD4-210ENST00000544040 PCDHB18PQ96TA0 734 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 AIFM2Q9BRQ8 373 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 IKZF4Q9H2S9 585 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 A0A1W2PQ67 120 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 TCRBV7S2A1N4TA0A589 114 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 RASGRP1O95267 797 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 PAPSS2O95340 614 aaPredicted RBP15.29■□□□□ 0.04
CHD4-210ENST00000544040 CTNNB1P35222 781 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 GANABQ14697 944 aaKnown RBP15.29■□□□□ 0.04
CHD4-210ENST00000544040 GRM3Q14832 879 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 TCEAL6Q6IPX3 200 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 LINGO4Q6UY18 593 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 ASB18Q6ZVZ8 466 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 OR8D1Q8WZ84 308 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 DUSP16Q9BY84 665 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 COMMD4Q9H0A8 199 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 KCNMB3Q9NPA1 279 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 KCND1Q9NSA2 647 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 PLCL2Q9UPR0 1127 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 PCDHGB3Q9Y5G1 929 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 WASF2Q9Y6W5 498 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 MAU2Q9Y6X3 613 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 OR2AG2A6NM03 316 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 ENPP3O14638 875 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 BRCC3P46736 316 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 IDH3AP50213 366 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 ADAM8P78325 824 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 CLCQ05315 142 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 BNIP1Q12981 228 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 COLEC12Q5KU26 742 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 MCEMP1Q8IX19 187 aa15.29■□□□□ 0.04
CHD4-210ENST00000544040 MRPS33Q9Y291 106 aaKnown RBP15.29■□□□□ 0.04
CHD4-210ENST00000544040 LRRC10BA6NIK2 292 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 OR1I1O60431 355 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 PSEN1P49768 467 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 IST1P53990 364 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 MPP2Q14168 576 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 SHC3Q92529 594 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 UFD1Q92890 307 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 AZIN2Q96A70 460 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 COQ8BQ96D53 544 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 MAN2B2Q9Y2E5 1009 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 SPEF1Q9Y4P9 236 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 CYP3A4P08684 503 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 USF2Q15853 346 aaPredicted RBP15.28■□□□□ 0.04
CHD4-210ENST00000544040 ZCCHC12Q6PEW1 402 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 PHYKPLQ8IUZ5 450 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 CENPNQ96H22 339 aaPredicted RBP15.28■□□□□ 0.04
CHD4-210ENST00000544040 AGXT2Q9BYV1 514 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 KCTD5Q9NXV2 234 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 EVLQ9UI08 416 aaPredicted RBP15.28■□□□□ 0.04
CHD4-210ENST00000544040 GATBO75879 557 aaKnown RBP15.28■□□□□ 0.04
CHD4-210ENST00000544040 CD52P31358 61 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 TMC8Q8IU68 726 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 ZCCHC10Q8TBK6 192 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 CCDC120Q96HB5 630 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 ABCA8O94911 1581 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 SEPT4O43236 478 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 SCGB1D2O95969 90 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 PKMP14618 531 aaKnown RBP15.28■□□□□ 0.04
CHD4-210ENST00000544040 AHCYP23526 432 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 FSHRP23945 695 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 WASP42768 502 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 PTPN9P43378 593 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 CNPY1Q3B7I2 92 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 SIDT2Q8NBJ9 832 aaKnown RBP15.28■□□□□ 0.04
CHD4-210ENST00000544040 SLC38A4Q969I6 547 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 DNAJC19Q96DA6 116 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.28■□□□□ 0.04
CHD4-210ENST00000544040 IQSEC2Q5JU85 1478 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 CD163L1Q9NR16 1453 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 ATG13O75143 517 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 OAZ1P54368 228 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 UGCGQ16739 394 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 ADNP2Q6IQ32 1131 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 GLIS2Q9BZE0 524 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms