RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 GPR89AB7ZAQ6 455 aa20.47■□□□□ 0.87
OTUB1-211ENST00000543004 GPR89BP0CG08 455 aa20.47■□□□□ 0.87
OTUB1-211ENST00000543004 RPS3P23396 243 aaKnown RBP eCLIP20.47■□□□□ 0.872e-6■■■■□ 19.8
OTUB1-211ENST00000543004 CD151P48509 253 aa20.47■□□□□ 0.87
OTUB1-211ENST00000543004 CSRP2Q16527 193 aa20.47■□□□□ 0.87
OTUB1-211ENST00000543004 PTRHD1Q6GMV3 140 aaKnown RBP20.47■□□□□ 0.87
OTUB1-211ENST00000543004 XKR5Q6UX68 686 aa20.47■□□□□ 0.87
OTUB1-211ENST00000543004 ZC3HC1Q86WB0 502 aaKnown RBP20.47■□□□□ 0.87
OTUB1-211ENST00000543004 LRRC6Q86X45 466 aa20.47■□□□□ 0.87
OTUB1-211ENST00000543004 GATAD2AQ86YP4 633 aa20.47■□□□□ 0.87
OTUB1-211ENST00000543004 MINDY1Q8N5J2 469 aa20.47■□□□□ 0.87
OTUB1-211ENST00000543004 GABPB2Q8TAK5 448 aaPredicted RBP20.47■□□□□ 0.87
OTUB1-211ENST00000543004 LMX1AQ8TE12 382 aa20.47■□□□□ 0.87
OTUB1-211ENST00000543004 MED16Q9Y2X0 877 aa20.47■□□□□ 0.87
OTUB1-211ENST00000543004 POC1B-GALNT4F8VUJ3 575 aa20.46■□□□□ 0.87
OTUB1-211ENST00000543004 PFDN6O15212 129 aa20.46■□□□□ 0.87
OTUB1-211ENST00000543004 KMOO15229 486 aa20.46■□□□□ 0.87
OTUB1-211ENST00000543004 PIAS2O75928 621 aa20.46■□□□□ 0.87
OTUB1-211ENST00000543004 AP2A2O94973 939 aa20.46■□□□□ 0.87
OTUB1-211ENST00000543004 TRIM16O95361 564 aa20.46■□□□□ 0.87
OTUB1-211ENST00000543004 OR56A5P0C7T3 313 aa20.46■□□□□ 0.87
OTUB1-211ENST00000543004 CTSEP14091 401 aa20.46■□□□□ 0.87
OTUB1-211ENST00000543004 PKMP14618 531 aaKnown RBP20.46■□□□□ 0.87
OTUB1-211ENST00000543004 BLKP51451 505 aa20.46■□□□□ 0.87
OTUB1-211ENST00000543004 ADARP55265 1226 aaKnown RBP20.46■□□□□ 0.87
OTUB1-211ENST00000543004 HNRNPKP61978 463 aaKnown RBP eCLIP20.46■□□□□ 0.87
OTUB1-211ENST00000543004 BRD3Q15059 726 aa20.46■□□□□ 0.87
OTUB1-211ENST00000543004 INSCQ1MX18 579 aa20.46■□□□□ 0.87
OTUB1-211ENST00000543004 IL27RAQ6UWB1 636 aa20.46■□□□□ 0.87
OTUB1-211ENST00000543004 FAM83HQ6ZRV2 1179 aaPredicted RBP20.46■□□□□ 0.87
OTUB1-211ENST00000543004 ZNF548Q8NEK5 533 aaPredicted RBP20.46■□□□□ 0.87
OTUB1-211ENST00000543004 OR2W6PQ8NHA6 318 aa20.46■□□□□ 0.87
OTUB1-211ENST00000543004 SCG3Q8WXD2 468 aaKnown RBP20.46■□□□□ 0.87
OTUB1-211ENST00000543004 ZDHHC5Q9C0B5 715 aa20.46■□□□□ 0.87
OTUB1-211ENST00000543004 KLC4Q9NSK0 619 aa20.46■□□□□ 0.87
OTUB1-211ENST00000543004 GNPTGQ9UJJ9 305 aa20.46■□□□□ 0.87
OTUB1-211ENST00000543004 CCDC151A5D8V7 595 aa20.45■□□□□ 0.87
OTUB1-211ENST00000543004 ESR1P03372 595 aa20.45■□□□□ 0.87
OTUB1-211ENST00000543004 DGKAP23743 735 aa20.45■□□□□ 0.87
OTUB1-211ENST00000543004 GCAP28676 217 aa20.45■□□□□ 0.87
OTUB1-211ENST00000543004 RXRGP48443 463 aa20.45■□□□□ 0.87
OTUB1-211ENST00000543004 ARRB1P49407 418 aaPredicted RBP20.45■□□□□ 0.87
OTUB1-211ENST00000543004 TIAL1Q01085 375 aaKnown RBP eCLIP20.45■□□□□ 0.87
OTUB1-211ENST00000543004 NFE2L1Q14494 772 aa20.45■□□□□ 0.87
OTUB1-211ENST00000543004 SLC30A9Q6PML9 568 aa20.45■□□□□ 0.87
OTUB1-211ENST00000543004 GALNT7Q86SF2 657 aa20.45■□□□□ 0.87
OTUB1-211ENST00000543004 SFTPA2Q8IWL1 248 aa20.45■□□□□ 0.87
OTUB1-211ENST00000543004 SLC25A45Q8N413 288 aa20.45■□□□□ 0.87
OTUB1-211ENST00000543004 ZNF514Q96K75 400 aaPredicted RBP20.45■□□□□ 0.87
OTUB1-211ENST00000543004 PAFAH2Q99487 392 aa20.45■□□□□ 0.87
OTUB1-211ENST00000543004 CPNE1Q99829 537 aa20.45■□□□□ 0.87
OTUB1-211ENST00000543004 TRNAU1APQ9NX07 287 aaKnown RBP20.45■□□□□ 0.87
OTUB1-211ENST00000543004 VPS9D1Q9Y2B5 631 aa20.45■□□□□ 0.87
OTUB1-211ENST00000543004 MTO1Q9Y2Z2 717 aaKnown RBP20.45■□□□□ 0.87
OTUB1-211ENST00000543004 ARID1BQ8NFD5 2236 aaPredicted RBP20.45■□□□□ 0.86
OTUB1-211ENST00000543004 EXOC1LA0A1B0GW35 172 aa20.45■□□□□ 0.86
OTUB1-211ENST00000543004 CDX4O14627 284 aaPredicted RBP20.45■□□□□ 0.86
OTUB1-211ENST00000543004 CER1O95813 267 aa20.45■□□□□ 0.86
OTUB1-211ENST00000543004 EPHA8P29322 1005 aaPredicted RBP20.45■□□□□ 0.86
OTUB1-211ENST00000543004 CCR7P32248 378 aa20.45■□□□□ 0.86
OTUB1-211ENST00000543004 GP5P40197 560 aa20.45■□□□□ 0.86
OTUB1-211ENST00000543004 ATXN3P54252 364 aaPredicted RBP20.45■□□□□ 0.86
OTUB1-211ENST00000543004 CSE1LP55060 971 aaKnown RBP20.45■□□□□ 0.86
OTUB1-211ENST00000543004 MAP9Q49MG5 647 aa20.45■□□□□ 0.86
OTUB1-211ENST00000543004 ZNF658BQ4V348 819 aaPredicted RBP20.45■□□□□ 0.86
OTUB1-211ENST00000543004 PRR23CQ6ZRP0 262 aa20.45■□□□□ 0.86
OTUB1-211ENST00000543004 AMZ2Q86W34 360 aa20.45■□□□□ 0.86
OTUB1-211ENST00000543004 MREGQ8N565 214 aa20.45■□□□□ 0.86
OTUB1-211ENST00000543004 OXR1Q8N573 874 aa20.45■□□□□ 0.86
OTUB1-211ENST00000543004 GPATCH11Q8N954 259 aa20.45■□□□□ 0.86
OTUB1-211ENST00000543004 ZBTB9Q96C00 473 aa20.45■□□□□ 0.86
OTUB1-211ENST00000543004 VPS39Q96JC1 886 aa20.45■□□□□ 0.86
OTUB1-211ENST00000543004 LINC00615Q96LM1 132 aaPredicted RBP20.45■□□□□ 0.86
OTUB1-211ENST00000543004 RBBP8Q99708 897 aa20.45■□□□□ 0.86
OTUB1-211ENST00000543004 SLC30A3Q99726 388 aa20.45■□□□□ 0.86
OTUB1-211ENST00000543004 CCM2Q9BSQ5 444 aa20.45■□□□□ 0.86
OTUB1-211ENST00000543004 AARSD1Q9BTE6 412 aaKnown RBP20.45■□□□□ 0.86
OTUB1-211ENST00000543004 SARS2Q9NP81 518 aaKnown RBP20.45■□□□□ 0.86
OTUB1-211ENST00000543004 NSMCE4AQ9NXX6 385 aa20.45■□□□□ 0.86
OTUB1-211ENST00000543004 TXNDC16Q9P2K2 825 aa20.45■□□□□ 0.86
OTUB1-211ENST00000543004 PCDHB1Q9Y5F3 818 aa20.45■□□□□ 0.86
OTUB1-211ENST00000543004 DMXL1Q9Y485 3027 aa20.44■□□□□ 0.86
OTUB1-211ENST00000543004 H3BM21 787 aa20.44■□□□□ 0.86
OTUB1-211ENST00000543004 AQP9O43315 295 aa20.44■□□□□ 0.86
OTUB1-211ENST00000543004 GDF9O60383 454 aa20.44■□□□□ 0.86
OTUB1-211ENST00000543004 EML2O95834 649 aa20.44■□□□□ 0.86
OTUB1-211ENST00000543004 CDKN2DP55273 166 aa20.44■□□□□ 0.86
OTUB1-211ENST00000543004 ARHGAP8P85298 464 aa20.44■□□□□ 0.86
OTUB1-211ENST00000543004 KLHL38Q2WGJ6 581 aa20.44■□□□□ 0.86
OTUB1-211ENST00000543004 BEND6Q5SZJ8 279 aaPredicted RBP20.44■□□□□ 0.86
OTUB1-211ENST00000543004 PIM3Q86V86 326 aa20.44■□□□□ 0.86
OTUB1-211ENST00000543004 GPBAR1Q8TDU6 330 aa20.44■□□□□ 0.86
OTUB1-211ENST00000543004 SAP25Q8TEE9 199 aa20.44■□□□□ 0.86
OTUB1-211ENST00000543004 SLC44A1Q8WWI5 657 aa20.44■□□□□ 0.86
OTUB1-211ENST00000543004 ELMO1Q92556 727 aa20.44■□□□□ 0.86
OTUB1-211ENST00000543004 EDEM2Q9BV94 578 aa20.44■□□□□ 0.86
OTUB1-211ENST00000543004 OSGEPL1Q9H4B0 414 aa20.44■□□□□ 0.86
OTUB1-211ENST00000543004 RHOJQ9H4E5 214 aa20.44■□□□□ 0.86
OTUB1-211ENST00000543004 SPASTQ9UBP0 616 aa20.44■□□□□ 0.86
OTUB1-211ENST00000543004 FAM95CA0A1B0GW59 222 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms