RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 KCNN3Q9UGI6 736 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 R3HDM2Q9Y2K5 976 aaKnown RBP5.5□□□□□ -1.53
DDB1-219ENST00000541513 COPG1Q9Y678 874 aaKnown RBP5.5□□□□□ -1.53
DDB1-219ENST00000541513 U3KQE9 123 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 SPACA6W5XKT8 324 aa5.5□□□□□ -1.53
DDB1-219ENST00000541513 MYH1P12882 1939 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 A0A087WZY1 265 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 C2orf92A0A1B0GVN3 265 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 ARHGAP42A6NI28 874 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 KIAA1324LA8MWY0 1029 aaPredicted RBP5.49□□□□□ -1.53
DDB1-219ENST00000541513 MAGEB17A8MXT2 336 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 FOXO6A8MYZ6 492 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 H0Y8G0 127 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 TULP2O00295 520 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 MEIS2O14770 477 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 PRDM1O75626 825 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 VNN2O95498 520 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 GH1P01241 217 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 IL1AP01583 271 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 CEACAM5P06731 702 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 DBHP09172 617 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 CCDC130P13994 396 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 DRD1P21728 446 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 NR2F2P24468 414 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 KLRC2P26717 231 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 EPHA3P29320 983 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 ALDH4A1P30038 563 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 PRKAR1BP31321 381 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 OTX2P32243 289 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 PXNP49023 591 aaPredicted RBP5.49□□□□□ -1.53
DDB1-219ENST00000541513 SUOXP51687 545 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 CLCNKBP51801 687 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 ZNF134P52741 427 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 DGKQP52824 942 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 GALCP54803 685 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 PRRX1P54821 245 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 HADHBP55084 474 aaKnown RBP5.49□□□□□ -1.53
DDB1-219ENST00000541513 IRX1P78414 480 aaPredicted RBP5.49□□□□□ -1.53
DDB1-219ENST00000541513 NUCB2P80303 420 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 TFAP4Q01664 338 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 GCNT1Q02742 428 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 TAP2Q03519 686 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 SEMA3BQ13214 749 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 RUNX2Q13950 521 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 PTPRCAPQ14761 206 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 CEBPEQ15744 281 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 AASDHQ4L235 1098 aaPredicted RBP5.49□□□□□ -1.53
DDB1-219ENST00000541513 ZNF648Q5T619 568 aaPredicted RBP5.49□□□□□ -1.53
DDB1-219ENST00000541513 PHF19Q5T6S3 580 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 C1orf185Q5T7R7 199 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 CLEC2AQ6UVW9 174 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 CLEC9AQ6UXN8 241 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 ZAR1Q86SH2 424 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 SPATA24Q86W54 205 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 ZNF573Q86YE8 665 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 PSTKQ8IV42 348 aaKnown RBP5.49□□□□□ -1.53
DDB1-219ENST00000541513 C16orf71Q8IYS4 520 aaPredicted RBP5.49□□□□□ -1.53
DDB1-219ENST00000541513 SCYL3Q8IZE3 742 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 AMER2Q8N7J2 671 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 UXS1Q8NBZ7 420 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 PLA2G15Q8NCC3 412 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 FAM76AQ8TAV0 307 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 ACTRT2Q8TDY3 377 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 ELP5Q8TE02 316 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 KAT2AQ92830 837 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 TRMT61AQ96FX7 289 aaKnown RBP5.49□□□□□ -1.53
DDB1-219ENST00000541513 ZBED3Q96IU2 234 aaPredicted RBP5.49□□□□□ -1.53
DDB1-219ENST00000541513 RPL10LQ96L21 214 aaKnown RBP5.49□□□□□ -1.53
DDB1-219ENST00000541513 SPATA13Q96N96 652 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 NECTIN4Q96NY8 510 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 USP28Q96RU2 1077 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 UBL7Q96S82 380 aaPredicted RBP5.49□□□□□ -1.53
DDB1-219ENST00000541513 CDK5RAP1Q96SZ6 601 aaKnown RBP5.49□□□□□ -1.53
DDB1-219ENST00000541513 XKR8Q9H6D3 395 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 NOL11Q9H8H0 719 aaKnown RBP5.49□□□□□ -1.53
DDB1-219ENST00000541513 CNOT10Q9H9A5 744 aaKnown RBP5.49□□□□□ -1.53
DDB1-219ENST00000541513 GBA2Q9HCG7 927 aaPredicted RBP5.49□□□□□ -1.53
DDB1-219ENST00000541513 KLC4Q9NSK0 619 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 RAB20Q9NX57 234 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 IL20Q9NYY1 176 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 CHMP5Q9NZZ3 219 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 SPATA7Q9P0W8 599 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 ATP6V1HQ9UI12 483 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 HACL1Q9UJ83 578 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 TSPAN16Q9UKR8 245 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 CLEC4AQ9UMR7 237 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 SNX7Q9UNH6 387 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 ZNF148Q9UQR1 794 aa5.49□□□□□ -1.53
DDB1-219ENST00000541513 MRPS7Q9Y2R9 242 aaKnown RBP5.49□□□□□ -1.53
DDB1-219ENST00000541513 RFX7Q2KHR2 1363 aa5.48□□□□□ -1.53
DDB1-219ENST00000541513 LOC100653049A0A140TA62 436 aa5.48□□□□□ -1.53
DDB1-219ENST00000541513 C13orf42A0A1B0GVH6 325 aa5.48□□□□□ -1.53
DDB1-219ENST00000541513 PRR5-ARHGAP8B1AHC4 643 aa5.48□□□□□ -1.53
DDB1-219ENST00000541513 NDUFS8O00217 210 aa5.48□□□□□ -1.53
DDB1-219ENST00000541513 EBAG9O00559 213 aa5.48□□□□□ -1.53
DDB1-219ENST00000541513 TRIM24O15164 1050 aa5.48□□□□□ -1.53
DDB1-219ENST00000541513 ST8SIA3O43173 380 aa5.48□□□□□ -1.53
DDB1-219ENST00000541513 MTX2O75431 263 aa5.48□□□□□ -1.53
DDB1-219ENST00000541513 KRT34O76011 436 aa5.48□□□□□ -1.53
DDB1-219ENST00000541513 OR6B1O95007 311 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms