RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 NFASCO94856 1347 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 A0A0U1RQF3 1178 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 SHISA7A6NL88 538 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 INAFM1C9JVW0 142 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 DDX39AO00148 427 aaKnown RBP5.57□□□□□ -1.52
CLIP1-207ENST00000536634 IKBKBO14920 756 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 PIP5K1CO60331 668 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 HBP1O60381 514 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 CSDE1O75534 798 aaKnown RBP5.57□□□□□ -1.52
CLIP1-207ENST00000536634 PROS1P07225 676 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 LAMP2P13473 410 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 AVPR1AP37288 418 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 CLCNKBP51801 687 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 PMS2P54278 862 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 NLRP11P59045 1033 aaKnown RBP5.57□□□□□ -1.52
CLIP1-207ENST00000536634 GPS2Q13227 327 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 GIT2Q14161 759 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 ERV3-1Q14264 604 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 NONOQ15233 471 aaKnown RBP eCLIP5.57□□□□□ -1.52
CLIP1-207ENST00000536634 MLF2Q15773 248 aaPredicted RBP5.57□□□□□ -1.52
CLIP1-207ENST00000536634 ADCK5Q3MIX3 580 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 Q6ZSV7 163 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 TRILQ7L0X0 811 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 BHLHA9Q7RTU4 235 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 METTL13Q8N6R0 699 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 PRR26Q8N8Z3 221 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 CEP76Q8TAP6 659 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 ADAMTS15Q8TE58 950 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 STAMQ92783 540 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 RNFT2Q96EX2 444 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 PPP1R10Q96QC0 940 aaKnown RBP5.57□□□□□ -1.52
CLIP1-207ENST00000536634 TEFMQ96QE5 360 aaKnown RBP5.57□□□□□ -1.52
CLIP1-207ENST00000536634 SF3B5Q9BWJ5 86 aaKnown RBP5.57□□□□□ -1.52
CLIP1-207ENST00000536634 MRPL9Q9BYD2 267 aaKnown RBP5.57□□□□□ -1.52
CLIP1-207ENST00000536634 LTB4R2Q9NPC1 389 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 NLKQ9UBE8 527 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 ZNF580Q9UK33 172 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 GMEB2Q9UKD1 530 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 PCDHGB3Q9Y5G1 929 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 SPAG17Q6Q759 2223 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 UNC79Q9P2D8 2635 aa5.57□□□□□ -1.52
CLIP1-207ENST00000536634 GREB1Q4ZG55 1949 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 HSPB6O14558 160 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 TEX28O15482 410 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 SPRY3O43610 288 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 DDHD2O94830 711 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 CLDN7O95471 211 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 CBX6O95503 412 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 PLA2G2AP14555 144 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 NT5C2P49902 561 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 SLC26A2P50443 739 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 GPC3P51654 580 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 ROR2Q01974 943 aaKnown RBP5.56□□□□□ -1.52
CLIP1-207ENST00000536634 CBWD5Q5RIA9 395 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 UBAP2Q5T6F2 1119 aaKnown RBP5.56□□□□□ -1.52
CLIP1-207ENST00000536634 TMEM268Q5VZI3 342 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 RUSC1-AS1Q66K80 236 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 NAPEPLDQ6IQ20 393 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 HEPHL1Q6MZM0 1159 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 FAM43BQ6ZT52 329 aaPredicted RBP5.56□□□□□ -1.52
CLIP1-207ENST00000536634 TRMT1LQ7Z2T5 733 aaKnown RBP5.56□□□□□ -1.52
CLIP1-207ENST00000536634 FBXL14Q8N1E6 418 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 BICD2Q8TD16 824 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 CLDN23Q96B33 292 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 MXRA8Q9BRK3 442 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 SDF4Q9BRK5 362 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 ZPBPQ9BS86 351 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 KRT23Q9C075 422 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 IL25Q9H293 177 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 CHMP4BQ9H444 224 aaKnown RBP5.56□□□□□ -1.52
CLIP1-207ENST00000536634 MARCH5Q9NX47 278 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 SEL1LQ9UBV2 794 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 MYO6Q9UM54 1294 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 DHDHQ9UQ10 334 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 CACNA1EQ15878 2313 aa5.56□□□□□ -1.52
CLIP1-207ENST00000536634 COL12A1Q99715 3063 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 COL4A2P08572 1712 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 GTPBP1O00178 669 aaKnown RBP5.55□□□□□ -1.52
CLIP1-207ENST00000536634 LDB2O43679 373 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 PLEKHA8P1O95397 391 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 GLUD1P00367 558 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 RETP07949 1114 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 NGFRP08138 427 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 DARSP14868 501 aaKnown RBP5.55□□□□□ -1.52
CLIP1-207ENST00000536634 HOXC13P31276 330 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 GJC1P36383 396 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 SKIV2L2P42285 1042 aaKnown RBP5.55□□□□□ -1.52
CLIP1-207ENST00000536634 HALP42357 657 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 DPP6P42658 865 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 ENTPD1P49961 510 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 ZP1P60852 638 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 NTHL1P78549 312 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 ABATP80404 500 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 SRSF5Q13243 272 aaKnown RBP5.55□□□□□ -1.52
CLIP1-207ENST00000536634 DRP2Q13474 957 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 IMMTQ16891 758 aaKnown RBP5.55□□□□□ -1.52
CLIP1-207ENST00000536634 FBXO43Q4G163 708 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 CTXN3Q4LDR2 81 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 CWC27Q6UX04 472 aaKnown RBP5.55□□□□□ -1.52
CLIP1-207ENST00000536634 TPRG1Q6ZUI0 275 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms