RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 TRIM31Q9BZY9 425 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 CCDC68Q9H2F9 335 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 CAAP1Q9H8G2 361 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 SARS2Q9NP81 518 aaKnown RBP5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 WASH6PQ9NQA3 447 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 PRDM8Q9NQV8 689 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 POT1Q9NUX5 634 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 KCNK4Q9NYG8 393 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 CPNE7Q9UBL6 633 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 TBC1D29Q9UFV1 150 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 SLC2A6Q9UGQ3 507 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 GNPTGQ9UJJ9 305 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 CDC23Q9UJX2 597 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 KLK13Q9UKR3 277 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 TMPRSS11EQ9UL52 423 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 MSRB2Q9Y3D2 182 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 NEU2Q9Y3R4 380 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 PLEKHM1Q9Y4G2 1056 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 HEBP2Q9Y5Z4 205 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 RPS6KL1Q9Y6S9 549 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 RNF215Q9Y6U7 377 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 U3KQA8 63 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 GON4LQ3T8J9 2241 aa5.31□□□□□ -1.56
HMGB1P40-201ENST00000525121 TMEM131Q92545 1883 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 ZNF292O60281 2723 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 VPS13AQ96RL7 3174 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 IGLV3-16A0A075B6K0 115 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 TRBV23OR9-2A0A075B6M9 112 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 C17orf113A0A1B0GUU1 675 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 TCRBV7S3A2A0A539 114 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 CTAGE15A4D2H0 777 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 FAM149AA5PLN7 773 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 TMEM8BA6NDV4 472 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 LILRA5A6NI73 299 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 D6RAR5 112 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 E5RI56 91 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 H3BMM5 538 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 PRMT5O14744 637 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 LIN7AO14910 233 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 KPNA5O15131 536 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 AVILO75366 819 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 USP1O94782 785 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 SEC31AO94979 1220 aaKnown RBP5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 CPNE6O95741 557 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 RPN2P04844 631 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 APOA4P06727 396 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 CTAGE8P0CG41 777 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 AMD1P17707 334 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 SPINK2P20155 84 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 OGNP20774 298 aaKnown RBP5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 PSMA3P25788 255 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 RPL10P27635 214 aaKnown RBP5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 NDUFS1P28331 727 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 NMBRP28336 390 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 PTGIRP43119 386 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 CTSCP53634 463 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 ITGA8P53708 1063 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 EPHA4P54764 986 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 DRG2P55039 364 aaKnown RBP5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 INHBCP55103 352 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 CCL7P80098 99 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 CAV1Q03135 178 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 TARDBPQ13148 414 aaKnown RBP eCLIP5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 RPA4Q13156 261 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 BOP1Q14137 746 aaKnown RBP5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 NFE2L1Q14494 772 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 LONRF1Q17RB8 773 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 BBS9Q3SYG4 887 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 ANKRD20A4Q4UJ75 823 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 SPANXN3Q5MJ09 141 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 PHF19Q5T6S3 580 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 METRNLQ641Q3 311 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 ZNF470Q6ECI4 717 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 ARMC6Q6NXE6 501 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 IYDQ6PHW0 289 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 ABRAXAS1Q6UWZ7 409 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 CCNI2Q6ZMN8 369 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 CEP128Q6ZU80 1094 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 CENPUQ71F23 418 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 ZNF534Q76KX8 674 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 ZNF438Q7Z4V0 828 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 CTAGE6Q86UF2 777 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 PIM3Q86V86 326 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 CAND1Q86VP6 1230 aaKnown RBP5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 C17orf82Q86X59 251 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 ZNF547Q8IVP9 402 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 CTAGE4Q8IX94 777 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 LMNTD2Q8IXW0 634 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 PIANPQ8IYJ0 282 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 CFAP206Q8IYR0 622 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 CACTIN-AS1Q8N1I8 211 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 CLDN19Q8N6F1 224 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 DCBLD1Q8N8Z6 715 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 PATE1Q8WXA2 126 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 ELMO1Q92556 727 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 TMEM159Q96B96 161 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 LRRC39Q96DD0 335 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 MFSD3Q96ES6 412 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 CFAP36Q96G28 342 aa5.3□□□□□ -1.56
HMGB1P40-201ENST00000525121 LINC00615Q96LM1 132 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms