RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 EPB41L1Q9H4G0 881 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 UCK1Q9HA47 277 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 CATSPERZQ9NTU4 200 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 POT1Q9NUX5 634 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 ACSL5Q9ULC5 683 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 DNAJC16Q9Y2G8 782 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 RP1P56715 2156 aa12.34□□□□□ -0.43
VEGFA-225ENST00000523950 ASXL3Q9C0F0 2248 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 OR51F1A6NGY5 319 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 PDZK1P1A8MUH7 402 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 TMX2-CTNND1H3BSU7 103 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 PFDN6O15212 129 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 TTI1O43156 1089 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 EML2O95834 649 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 FTH1P02794 183 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 RPLP0P05388 317 aaKnown RBP12.33□□□□□ -0.44
VEGFA-225ENST00000523950 OR56A5P0C7T3 313 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 XRCC1P18887 633 aaPredicted RBP12.33□□□□□ -0.44
VEGFA-225ENST00000523950 IVDP26440 423 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 NMBRP28336 390 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 EPHA4P54764 986 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 UBE2IP63279 158 aaKnown RBP12.33□□□□□ -0.44
VEGFA-225ENST00000523950 HHEXQ03014 270 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 TUBB2AQ13885 445 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 DNAJC21Q5F1R6 531 aaKnown RBP12.33□□□□□ -0.44
VEGFA-225ENST00000523950 METRNLQ641Q3 311 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 CASC4Q6P4E1 433 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 ZNF449Q6P9G9 518 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 DET1Q7L5Y6 550 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 TMEM135Q86UB9 458 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 SFTPA2Q8IWL1 248 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 MFSD3Q96ES6 412 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 GFM1Q96RP9 751 aaKnown RBP12.33□□□□□ -0.44
VEGFA-225ENST00000523950 KRT12Q99456 494 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 SLC38A3Q99624 504 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 DPYSL5Q9BPU6 564 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 CCM2Q9BSQ5 444 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 NAT9Q9BTE0 207 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 TUBB2BQ9BVA1 445 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 TSSK1BQ9BXA7 367 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 PRDM8Q9NQV8 689 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 CPNE7Q9UBL6 633 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 RABGEF1Q9UJ41 708 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 CDC23Q9UJX2 597 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 PIKFYVEQ9Y2I7 2098 aa12.33□□□□□ -0.44
VEGFA-225ENST00000523950 A0A1W2PQM1 296 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 TMEM8BA6NDV4 472 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 LILRA5A6NI73 299 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 GOLGA8MH3BSY2 632 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 PPM1DO15297 605 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 CD3EAPO15446 510 aaKnown RBP12.32□□□□□ -0.44
VEGFA-225ENST00000523950 AVILO75366 819 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 USP1O94782 785 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 PRSS56P0CW18 603 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 SPINK2P20155 84 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 CCL7P80098 99 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 PLOD1Q02809 727 aaPredicted RBP12.32□□□□□ -0.44
VEGFA-225ENST00000523950 TARDBPQ13148 414 aaKnown RBP eCLIP12.32□□□□□ -0.443e-6■■■■□ 20.1
VEGFA-225ENST00000523950 RPA4Q13156 261 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 SQSTM1Q13501 440 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 NFE2L1Q14494 772 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 WHAMMP3Q1A5X7 153 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 DNTTIP2Q5QJE6 756 aaKnown RBP12.32□□□□□ -0.44
VEGFA-225ENST00000523950 RNF187Q5TA31 235 aaPredicted RBP12.32□□□□□ -0.44
VEGFA-225ENST00000523950 MRNIPQ6NTE8 343 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 HIBCHQ6NVY1 386 aaPredicted RBP12.32□□□□□ -0.44
VEGFA-225ENST00000523950 LRRC6Q86X45 466 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 TRIM48Q8IWZ4 208 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 LMNTD2Q8IXW0 634 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 MYRIPQ8NFW9 859 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 GATA6Q92908 595 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 SNF8Q96H20 258 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 TMEM74Q96NL1 305 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 TCF12Q99081 682 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 NRSN2Q9GZP1 204 aa12.32□□□□□ -0.44
VEGFA-225ENST00000523950 EFCAB8A8MWE9 144 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 D6RAR5 112 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 PRMT5O14744 637 aaPredicted RBP12.31□□□□□ -0.44
VEGFA-225ENST00000523950 CSO75390 466 aaKnown RBP12.31□□□□□ -0.44
VEGFA-225ENST00000523950 URI1O94763 535 aaPredicted RBP12.31□□□□□ -0.44
VEGFA-225ENST00000523950 SEC31AO94979 1220 aaKnown RBP12.31□□□□□ -0.44
VEGFA-225ENST00000523950 VAPBO95292 243 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 CPNE6O95741 557 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 TTC4O95801 387 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 VIPP01282 170 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 POLBP06746 335 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 SLC35G4P0C7Q5 338 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 BRAFP15056 766 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 OGNP20774 298 aaKnown RBP12.31□□□□□ -0.44
VEGFA-225ENST00000523950 PBLDP30039 288 aaPredicted RBP12.31□□□□□ -0.44
VEGFA-225ENST00000523950 CCKBRP32239 447 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 CAMK2BQ13554 666 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 SEPT7Q16181 437 aaKnown RBP12.31□□□□□ -0.44
VEGFA-225ENST00000523950 KCTD19Q17RG1 926 aaPredicted RBP12.31□□□□□ -0.44
VEGFA-225ENST00000523950 ISXQ2M1V0 245 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 ANKRD20A4Q4UJ75 823 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 SDCCAG8Q86SQ7 713 aaPredicted RBP12.31□□□□□ -0.44
VEGFA-225ENST00000523950 PDIK1LQ8N165 341 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 GPR150Q8NGU9 434 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 OR10G6Q8NH81 332 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms