RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ERMP1Q7Z2K6 904 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 IRGQQ8WZA9 623 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 GPSM3Q9Y4H4 160 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 POLR3HQ9Y535 204 aaPredicted RBP10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 DGKBQ9Y6T7 804 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 SMCHD1A6NHR9 2005 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 A0A1W2PPW3 197 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 A8MT66 165 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 RFXANKO14593 260 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 MTHFD1P11586 935 aaKnown RBP10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 IDO1P14902 403 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 UGT1A6P19224 532 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 UGT1A1P22309 533 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 UGT1A4P22310 534 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 NR4A1P22736 598 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 WARSP23381 471 aaKnown RBP10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 UGT1A3P35503 534 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 UGT1A5P35504 534 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 CDK20Q8IZL9 346 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 RTL3Q8N8U3 475 aaKnown RBP10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 TXNDC5Q8NBS9 432 aaKnown RBP10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 KBTBD7Q8WVZ9 684 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 APOLD1Q96LR9 279 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 FCF1Q9Y324 198 aaKnown RBP10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 MYH9P35579 1960 aaKnown RBP10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 TTC24A2A3L6 582 aaPredicted RBP10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 KPNA5O15131 536 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 GRID2O43424 1007 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 SMIM18P0DKX4 95 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 CTSEP14091 401 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 ZNF12P17014 697 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 PROZP22891 400 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 AQP1P29972 269 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 SCNN1AP37088 669 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 LSM3P62310 102 aaKnown RBP10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 LIPEQ05469 1076 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 ANGPT1Q15389 498 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 FAM124AQ86V42 546 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 RALGPS2Q86X27 583 aaPredicted RBP10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 GATAD2AQ86YP4 633 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 RBM12BQ8IXT5 1001 aaKnown RBP10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 NCSTNQ92542 709 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 CLIP3Q96DZ5 547 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 FBXL20Q96IG2 436 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 GKN1Q9NS71 199 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 SLC2A6Q9UGQ3 507 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 EBF1Q9UH73 591 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 ENTPD4Q9Y227 616 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 SLC45A1Q9Y2W3 748 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 TPRKBQ9Y3C4 175 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 IGKV6D-21A0A0A0MT36 114 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 GLYATL1P3A0A0U1RQE8 302 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 OR2AG2A6NM03 316 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 BOLA2-SMG1P6H3BVE0 249 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 SGTAO43765 313 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 FTH1P02794 183 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 PFKMP08237 780 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 SLC5A2P31639 672 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 MAGEA3P43357 314 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 CCR4P51679 360 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 DGKKQ5KSL6 1271 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 TTC23Q5W5X9 447 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 TAPT1Q6NXT6 567 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 TXNDC11Q6PKC3 985 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 TMEM135Q86UB9 458 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 METTL25Q8N6Q8 603 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 SETD9Q8NE22 299 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 SLC9A7Q96T83 725 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 ALG2Q9H553 416 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 CD84Q9UIB8 345 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 CEPT1Q9Y6K0 416 aa10.72□□□□□ -0.69
PCDHGA1-202ENST00000517417 PIP5K1BO14986 540 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 PRAMEF1O95521 474 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 NUDT14O95848 222 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 CCDC159P0C7I6 412 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 CES1P23141 567 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 KRT20P35900 424 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 CXCR3P49682 368 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 ZBTB8BQ8NAP8 495 aaPredicted RBP10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 NPLOC4Q8TAT6 608 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 CERS4Q9HA82 394 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 CPQQ9Y646 472 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 LOC100506127A0A0U1RQW1 187 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 A0A1B0GVM2 712 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 TCAF2A6NFQ2 919 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 C1QTNF3-AMACRE9PGA6 284 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 J3QRK9 145 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 ENPP3O14638 875 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 CST1P01037 141 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 GPIP06744 558 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 SLC35E2BP0CK96 405 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 FEN1P39748 380 aaKnown RBP10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 HSPA7P48741 367 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 SMARCB1Q12824 385 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 ACAP2Q15057 778 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 TBC1D25Q3MII6 688 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 ZNF605Q86T29 641 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 LILRA2Q8N149 483 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 FBXL8Q96CD0 374 aa10.71□□□□□ -0.69
PCDHGA1-202ENST00000517417 TEPSINQ96N21 525 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms