RNA–Protein interactions for RNA: ENST00000515395.5

SSBP2-219, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-219ENST00000515395 FAM237BA0A1B0GVD1 139 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 FAM187AA6NFU0 413 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 MGAT4DA6NG13 374 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 CD3EAPO15446 510 aaKnown RBP10.04□□□□□ -0.8
SSBP2-219ENST00000515395 TCEA3O75764 348 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 AP2A2O94973 939 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 VAPBO95292 243 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 EML2O95834 649 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 MT-CO3P00414 261 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 FTH1P02794 183 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 RPL10P27635 214 aaKnown RBP10.04□□□□□ -0.8
SSBP2-219ENST00000515395 ALDH4A1P30038 563 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 GPR3P46089 330 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 TTPAP49638 278 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 PRLHRP49683 370 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 B4GALNT1Q00973 533 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 HHEXQ03014 270 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 DMPKQ09013 629 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 TUBB2AQ13885 445 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 WHAMMP3Q1A5X7 153 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 MRNIPQ6NTE8 343 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 CES3Q6UWW8 571 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 PACS1Q6VY07 963 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 SDCCAG8Q86SQ7 713 aaPredicted RBP10.04□□□□□ -0.8
SSBP2-219ENST00000515395 C17orf82Q86X59 251 aaPredicted RBP10.04□□□□□ -0.8
SSBP2-219ENST00000515395 CCNJLQ8IV13 435 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 PDIK1LQ8N165 341 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 MPP5Q8N3R9 675 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 OR2L2Q8NH16 312 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 KIF18AQ8NI77 898 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 SLC37A2Q8TED4 501 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 ZNF669Q96BR6 464 aaPredicted RBP10.04□□□□□ -0.8
SSBP2-219ENST00000515395 CXorf40BQ96DE9 158 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 MFSD3Q96ES6 412 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 DEPDC7Q96QD5 511 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 GFM1Q96RP9 751 aaKnown RBP10.04□□□□□ -0.8
SSBP2-219ENST00000515395 TUBB2BQ9BVA1 445 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.04□□□□□ -0.8
SSBP2-219ENST00000515395 ZMYND15Q9H091 742 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 SARS2Q9NP81 518 aaKnown RBP10.04□□□□□ -0.8
SSBP2-219ENST00000515395 ACSL5Q9ULC5 683 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 MSRB2Q9Y3D2 182 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 RPS6KL1Q9Y6S9 549 aa10.04□□□□□ -0.8
SSBP2-219ENST00000515395 C17orf113A0A1B0GUU1 675 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 FAM149AA5PLN7 773 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 PPM1DO15297 605 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 NDUFS3O75489 264 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 VIPP01282 170 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 RPLP0P05388 317 aaKnown RBP10.03□□□□□ -0.8
SSBP2-219ENST00000515395 POLBP06746 335 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 GSTM1P09488 218 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 SLC35G4P0C7Q5 338 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 OR56A5P0C7T3 313 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 XRCC1P18887 633 aaPredicted RBP10.03□□□□□ -0.8
SSBP2-219ENST00000515395 IVDP26440 423 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 FASLGP48023 281 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 ITGA8P53708 1063 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 DRG2P55039 364 aaKnown RBP10.03□□□□□ -0.8
SSBP2-219ENST00000515395 CCL7P80098 99 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 GSTM4Q03013 218 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 CALCOCO2Q13137 446 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 TARDBPQ13148 414 aaKnown RBP eCLIP10.03□□□□□ -0.82e-6■■□□□ 12.3
SSBP2-219ENST00000515395 THOC5Q13769 683 aaKnown RBP10.03□□□□□ -0.8
SSBP2-219ENST00000515395 NFE2L1Q14494 772 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 ANKRD20A4Q4UJ75 823 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 AGAP9Q5VTM2 703 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 KIAA0930Q6ICG6 404 aaPredicted RBP10.03□□□□□ -0.8
SSBP2-219ENST00000515395 ABRAXAS1Q6UWZ7 409 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 WASH2PQ6VEQ5 465 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 RBM44Q6ZP01 1051 aaKnown RBP10.03□□□□□ -0.8
SSBP2-219ENST00000515395 MICALCLQ6ZW33 695 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 SPRED1Q7Z699 444 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 CFAP206Q8IYR0 622 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 CACTIN-AS1Q8N1I8 211 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 CLDN19Q8N6F1 224 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 MNS1Q8NEH6 495 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 GABPB2Q8TAK5 448 aaPredicted RBP10.03□□□□□ -0.8
SSBP2-219ENST00000515395 HM13Q8TCT9 377 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 NAT14Q8WUY8 206 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 STAMBPL1Q96FJ0 436 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 AHCYL2Q96HN2 611 aaKnown RBP10.03□□□□□ -0.8
SSBP2-219ENST00000515395 LINC00615Q96LM1 132 aaPredicted RBP10.03□□□□□ -0.8
SSBP2-219ENST00000515395 SLC38A3Q99624 504 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 CCM2Q9BSQ5 444 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 TSSK1BQ9BXA7 367 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 RAB17Q9H0T7 212 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 LRRN3Q9H3W5 708 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 WASH6PQ9NQA3 447 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 KCNK4Q9NYG8 393 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 CPNE7Q9UBL6 633 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 RABGEF1Q9UJ41 708 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 PSMD13Q9UNM6 376 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 WASF3Q9UPY6 502 aa10.03□□□□□ -0.8
SSBP2-219ENST00000515395 UTP11Q9Y3A2 253 aaKnown RBP10.03□□□□□ -0.8
SSBP2-219ENST00000515395 COL27A1Q8IZC6 1860 aaPredicted RBP10.03□□□□□ -0.8
SSBP2-219ENST00000515395 FAM221BA6H8Z2 402 aa10.02□□□□□ -0.8
SSBP2-219ENST00000515395 A6NCN8 305 aa10.02□□□□□ -0.8
SSBP2-219ENST00000515395 RAD51CO43502 376 aa10.02□□□□□ -0.8
SSBP2-219ENST00000515395 CSO75390 466 aaKnown RBP10.02□□□□□ -0.8
SSBP2-219ENST00000515395 USP1O94782 785 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms