RNA–Protein interactions for RNA: ENST00000515266.1

MBD4-210, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-210ENST00000515266 MSH3P20585 1137 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 PON1P27169 355 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 GARSP41250 739 aaKnown RBP3.33□□□□□ -1.88
MBD4-210ENST00000515266 NR2C2P49116 596 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 NR0B1P51843 470 aaKnown RBP3.33□□□□□ -1.88
MBD4-210ENST00000515266 CDH8P55286 799 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 TUBB4BP68371 445 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 IKQ13123 557 aaPredicted RBP3.33□□□□□ -1.88
MBD4-210ENST00000515266 UBE2V1Q13404 147 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 CRYMQ14894 314 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 CCDC6Q16204 474 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 MEP1AQ16819 746 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 ZC2HC1CQ53FD0 456 aaPredicted RBP3.33□□□□□ -1.88
MBD4-210ENST00000515266 CEP85LQ5SZL2 805 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 SFMBT2Q5VUG0 894 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 CCDC30Q5VVM6 783 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 CHST9Q7L1S5 443 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 RSRC2Q7L4I2 434 aaKnown RBP3.33□□□□□ -1.88
MBD4-210ENST00000515266 MAATS1Q7Z4T9 603 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 STPG4Q8N801 248 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 CNBD1Q8NA66 436 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 TEX19Q8NA77 164 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 ZNF473Q8WTR7 871 aaKnown RBP3.33□□□□□ -1.88
MBD4-210ENST00000515266 SCFD2Q8WU76 684 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 FCAMRQ8WWV6 532 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 PGAM5Q96HS1 289 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 NUDCD1Q96RS6 583 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 SLC22A12Q96S37 553 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 NCAPGQ9BPX3 1015 aa3.33□□□□□ -1.88
MBD4-210ENST00000515266 MBNL1Q9NR56 388 aaKnown RBP3.33□□□□□ -1.88
MBD4-210ENST00000515266 SEPT11Q9NVA2 429 aaKnown RBP3.33□□□□□ -1.88
MBD4-210ENST00000515266 DDX43Q9NXZ2 648 aaKnown RBP3.33□□□□□ -1.88
MBD4-210ENST00000515266 TEX13DA0A0J9YY54 714 aaPredicted RBP3.32□□□□□ -1.88
MBD4-210ENST00000515266 C15orf62A8K5M9 175 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 CYSRT1A8MQ03 144 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 CDRT15L2A8MXV6 281 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 H0YIN7 160 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 BLOC1S5-TXNDC5H3BN57 136 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 BAIAP3O94812 1187 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 NR3C1P04150 777 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 RB1P06400 928 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 ERVK-10P10266 1014 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 ATP12AP54707 1039 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 TMEM30BQ3MIR4 351 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 ZDHHC20Q5W0Z9 365 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 ARHGAP11AQ6P4F7 1023 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 RBMS3Q6XE24 437 aaKnown RBP3.32□□□□□ -1.88
MBD4-210ENST00000515266 C1orf122Q6ZSJ8 110 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 TRPT1Q86TN4 253 aaKnown RBP3.32□□□□□ -1.88
MBD4-210ENST00000515266 PTOV1Q86YD1 416 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 APLFQ8IW19 511 aaPredicted RBP3.32□□□□□ -1.88
MBD4-210ENST00000515266 WDSUB1Q8N9V3 476 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 TRIM58Q8NG06 486 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 LGALS12Q96DT0 336 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 SENP5Q96HI0 755 aaPredicted RBP3.32□□□□□ -1.88
MBD4-210ENST00000515266 DACH2Q96NX9 599 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 LITAFQ99732 161 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 SRSF8Q9BRL6 282 aaKnown RBP3.32□□□□□ -1.88
MBD4-210ENST00000515266 HGH1Q9BTY7 390 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 RBM4Q9BWF3 364 aaKnown RBP3.32□□□□□ -1.88
MBD4-210ENST00000515266 SEMA6AQ9H2E6 1030 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 APOBEC3GQ9HC16 384 aaKnown RBP3.32□□□□□ -1.88
MBD4-210ENST00000515266 ZBTB20Q9HC78 741 aaPredicted RBP3.32□□□□□ -1.88
MBD4-210ENST00000515266 SLC52A3Q9NQ40 469 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 NENFQ9UMX5 172 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 JRKLQ9Y4A0 524 aa3.32□□□□□ -1.88
MBD4-210ENST00000515266 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.32□□□□□ -1.88
MBD4-210ENST00000515266 PCDH7O60245 1069 aa3.31□□□□□ -1.88
MBD4-210ENST00000515266 CIDEAO60543 219 aa3.31□□□□□ -1.88
MBD4-210ENST00000515266 CGAP01215 116 aa3.31□□□□□ -1.88
MBD4-210ENST00000515266 CAPN3P20807 821 aa3.31□□□□□ -1.88
MBD4-210ENST00000515266 HOXC8P31273 242 aa3.31□□□□□ -1.88
MBD4-210ENST00000515266 HADHAP40939 763 aa3.31□□□□□ -1.88
MBD4-210ENST00000515266 RXRGP48443 463 aa3.31□□□□□ -1.88
MBD4-210ENST00000515266 DUOXA1Q1HG43 343 aa3.31□□□□□ -1.88
MBD4-210ENST00000515266 ZNF876PQ49A33 203 aa3.31□□□□□ -1.88
MBD4-210ENST00000515266 NDUFAF5Q5TEU4 345 aa3.31□□□□□ -1.88
MBD4-210ENST00000515266 FAM109BQ6ICB4 259 aaPredicted RBP3.31□□□□□ -1.88
MBD4-210ENST00000515266 ARID3BQ8IVW6 561 aaPredicted RBP3.31□□□□□ -1.88
MBD4-210ENST00000515266 TEX11Q8IYF3 940 aa3.31□□□□□ -1.88
MBD4-210ENST00000515266 SCYL3Q8IZE3 742 aa3.31□□□□□ -1.88
MBD4-210ENST00000515266 ADGRF2Q8IZF7 708 aa3.31□□□□□ -1.88
MBD4-210ENST00000515266 PRMT6Q96LA8 375 aaPredicted RBP3.31□□□□□ -1.88
MBD4-210ENST00000515266 DDOQ99489 341 aa3.31□□□□□ -1.88
MBD4-210ENST00000515266 NAP1L4Q99733 375 aaKnown RBP3.31□□□□□ -1.88
MBD4-210ENST00000515266 C1QTNF1Q9BXJ1 281 aa3.31□□□□□ -1.88
MBD4-210ENST00000515266 FTOQ9C0B1 505 aaKnown RBP eCLIP3.31□□□□□ -1.88
MBD4-210ENST00000515266 SLC38A7Q9NVC3 462 aa3.31□□□□□ -1.88
MBD4-210ENST00000515266 GH2P01242 217 aa3.3□□□□□ -1.88
MBD4-210ENST00000515266 CLTBP09497 229 aa3.3□□□□□ -1.88
MBD4-210ENST00000515266 PPP2R2BQ00005 443 aa3.3□□□□□ -1.88
MBD4-210ENST00000515266 GAGE2BQ13066 116 aa3.3□□□□□ -1.88
MBD4-210ENST00000515266 MFAP5Q13361 173 aa3.3□□□□□ -1.88
MBD4-210ENST00000515266 PPIGQ13427 754 aaKnown RBP eCLIP3.3□□□□□ -1.88
MBD4-210ENST00000515266 IRF3Q14653 427 aa3.3□□□□□ -1.88
MBD4-210ENST00000515266 GAGE2EQ4V326 116 aa3.3□□□□□ -1.88
MBD4-210ENST00000515266 ASPRV1Q53RT3 343 aa3.3□□□□□ -1.88
MBD4-210ENST00000515266 FAM53AQ6NSI3 398 aaPredicted RBP3.3□□□□□ -1.88
MBD4-210ENST00000515266 GAGE2AQ6NT46 116 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms